Journal club

笹倉研究室トップページ > ジャーナルクラブ
笹倉研究室では、毎週金曜日に論文紹介セミナーを行っています。
ホヤ研究の論文やホヤ以外の生物を用いて行われた最新の論文を当番制で紹介し、研究室内の情報交換を図っています。
このページでは、セミナーで紹介された論文を以下に記録していきます。
     
 
     

2017年

 
  日程 論文 担当者
  6/30Holger Apitz and Iris Salecker
Retinal determination genes coordinate neuroepithelial specification and neurogenesis modes in the Drosophila optic lobe
Development(2016) 143, 2431-2422
pubmed / 日本語要約
 田島
    
  6/30Sidhaye J, Norden C.
Concerted action of neuroepithelial basal shrinkage and active epithelial migration ensures efficient  optic cup morphogenesis.
Elife.2017 Apr 4;6. pii: e22689. doi: 10.7554/eLife.22689.
pubmed / 日本語要約


 
 2/24Kvon EZ, et al.,
Progressive Loss of Function in a Limb Enhancer during Snake Evolution.
Cell. 2016 Oct 20;167(3):633-642.e11.
pubmed / 日本語要約
 松延
    
  2/24Lescroart F, Hamou W, Francou A, Théveniau-Ruissy M, Kelly RG, Buckingham M.
Clonal analysis reveals a common origin between nonsomite-derived neck muscles and heart myocardium.
Proc Natl Acad Sci U S A. 2015 Feb 3;112(5):1446-51.
pubmed / 日本語要約
 笹倉
    
  2/17Nakamura T, Gehrke AR, Lemberg J, Szymaszek J, Shubin NH.
Digits and fin rays share common developmental histories.
Nature. 2016 Sep 8;537(7619):225-228.
pubmed / 日本語要約
 田島
    
  2/17
Nishimura T, Honda H, Takeichi M.
Planar cell polarity links axes of spatialdynamics in neural-tube closure.
Cell. 2012 May 25;149(5):1084-97.
pubmed / 日本語要約
 山路
    
  2/10Lin Q, et al.
The seahorse genome and the evolution of its specialized morphology
Nature. 2016 Dec 14;540(7633):395-399.
pubmed / 日本語要約

 保住
  
 
  2/10Choi YJ et al.
Deficiency of microRNA miR-34a expands cell fate potential in pluripotent stem cells.
Science. 2017 Jan 12. doi: 10.1126/science.aag1927.
pubmed / 日本語要約
 三田
    
  1/20Orsolya Symmons, Leslie Pan, Silvia Remeseiro, Tugce Aktas, Felix Klein, Wolfgang Huber and Francois Spitz
The Shh topological domain facilitates the action of remote enhancers by reducing the effects of genomic distances.
Dev. Cell 39, 529–543 (2016)
pubmed / 日本語要約
 吉田
    
  1/13Choi J, Suzuki KT, Sakuma T, Shewade L, Yamamoto T, Buchholz DR.
Unliganded thyroid hormone receptor a regulates developmental timing via gene repression in Xenopus tropicalis.
Endocrinology 2015, 156, 735-744
pubmed / 日本語要約
笹倉
    
  1/13Roy, D.S., Arons, A., Mitchell, T.I., Pignatelli, M., Ryan, T.J., Tonegawa, S.
Memory retrieval by activating engram cells in mouse models of early Alzheimer’s disease
Nature. 2016. 531.
pubmed / 日本語要約
 松延
    
  1/6Coravos JS, Martin AC.
Apical Sarcomere-like Actomyosin Contracts Nonmuscle Drosophila Epithelial Cells.
Dev Cell. 2016 Nov 7;39(3):346-358.
pubmed / 日本語要約
 山路
    
  1/6Ignacio A. Navarrete and Michael Levine
Nodal and FGF coordinate ascidian neural tube morphogenesis
Development (2016) 143, 4665-46775
pubmed / 日本語要約
 田島
   

 

2016年

 
  日程 論文 担当者
   11/4     Sharma U, Conine CC, Shea JM, Boskovic A, Derr AG, Bing XY, Belleannee C, Kucukural A, Serra RW, Sun F, Song L, Carone BR, Ricci EP, Li XZ, Fauquier L, Moore MJ, Sullivan R, Mello CC, Garber M, Rando OJ.
Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals.
Science. 2016 Jan 22;351(6271):391-6.
pubmed / 日本語要約
 保住
       
   11/4     Ohira T, Suzuki T.
Precursors of tRNAs are stabilized by methylguanosine cap structures.
Nat Chem Biol. (2016) 12(8):648-55
pubmed / 日本語要約
 三田
       
   10/21 Richard CV Tyser, Antonio MA Miranda, Chiann-mun Chen, Sean M Davidson, Shankar Srinivas and Paul R Riley
Calcium handling precedes cardiac differentiation to initiate the first heartbeat.
eLife 2016;5:e17113
pubmed
 / 日本語要約
 吉田
       
   9/23 Hudson C, Sirour C, Yasuo H.
Foxa.a, Foxd and Fgf9/16/20 defines a transient mesendoderm regulatory state in ascidian embryos
elife. 2016 Jun 28;5. pii: e14692. doi: 10.7554/eLife.14692.
pubmed / 日本語要約
 山路
   
 
   9/23 Mishima Y, Tomari Y.
Codon Usage and 3' UTR Length Determine Maternal mRNA Stability in Zebrafish.
Mol Cell. 2016 Mar 17;61(6):874-85. doi:10.1016/j.molcel.2016.02.027.
pubmed / 日本語要約
 保住
       
   9/16 Van't Hof AE, Campagne P, Rigden DJ, Yung CJ, Lingley J, Quail MA, Hall N,
Darby AC, Saccheri IJ.
The industrial melanism mutation in British peppered moths is a transposable element.
Nature. 2016 Jun 1;534(7605):102-5. doi:10.1038/nature17951.
pubmed / 日本語要約
 三田
       
   9/16  Li W, Feng Z, Sternberg PW, Xu XZ.
A C. elegans stretch receptor neuron revealed by a mechanosensitive TRP channel homologue.
Nature. 2006 Mar 30;440(7084):684-7.
pubmed / 日本語要約
 笹倉
       
   9/9     Aires R, Jurberg AD, Leal F, Nóvoa A, Cohn MJ, Mallo M.
Oct4 Is a Key Regulator of Vertebrate Trunk Length Diversity.
Dev Cell. 2016 Aug8;38(3):262-74. doi: 10.1016/j.devcel.2016.06.021.
pubmed / 日本語要約
 吉田
       
   6/24 Scully D, Keane E, Batt E, Karunakaran P, Higgins DF, Itasaki N.
Hypoxia promotes production of neural crest cells in the embryonic head.
Development.2016 May 15;143(10):1742-52. doi: 10.1242/dev.131912
pubmed / 日本語要約
 山路
       
   6/24 Kimura T, Nagao Y, Hashimoto H, Yamamoto-Shiraishi Y, Yamamoto S, Yabe T, Takada S, Kinoshita M, Kuroiwa A, Naruse K.
Leucophores are similar to xanthophores in their specification and differentiation processes in medaka.
Proc Natl Acad Sci U S A. 2014 May 20;111(20):7343-8. doi: 10.1073/pnas.1311254111.
pubmed / 日本語要約
 田島
       
   6/17 Gainous TB, Wagner E, Levine M.
Diverse ETS transcription factors mediate FGF signaling in the Ciona anterior neural plate.
Dev Biol. 2015 Mar15;399(2):218-25. doi: 10.1016/j.ydbio.2014.12.032. 
pubmed / 日本語要約
笹倉
       
   6/10 Oda-Ishii I, Kubo A, Kari W, Suzuki N, Rothbacher U, Satou Y.
A Maternal System Initiating the Zygotic Developmental Program through Combinatorial Repression in the Ascidian Embryo.
PLoS Genet. 2016 May 6;12(5):e1006045.
pubmed / 日本語要約
 三田
   
 
   6/10 Lei Lei and Allan C. Spradling
Mouse oocytes differentiate through organelle enrichment from sister cyst germ cells.
Science. 2016 Apr 1;352(6281):95-9. doi: 10.1126
pubmed / 日本語要約
保住
       
   5/27 Mei-Juan Cai, Wen-Li Zhao, Yu-Pu Jing, Qian Song, Xiao-Qian Zhang, Jin-Xing Wang, Xiao-Fan Zhao
20-hydroxyecdysone activates Forkhead box O to promote proteolysis during Helicoverpa armigera molting
Development 2016 143: 1005-1015; doi: 10.1242/dev.128694
pubmed / 日本語要約
中畑
       
   5/27 Keiko Nakanishi, Kisa Kakiguchi, Shigenobu Yonemura, Akihiko Nakano, and Nobuhiro Morishima
Transient Ca2+ dependent from the endoplasmic reticulum is critical for skeletal myoblast differentiation
The FASEB Journal, vol. 29, 2137-2149, May, 2015
pubmed
 / 日本語要約
 松延
       
   5/27 Andras Szabo, Isidoro Cobo, Sharif Omara, Sophie McLachlan, Ray Keller and Roberto Mayor
The molecular basis of radial intercalation during tissue spreading in early development.
Dev. Cell 37, 213-225 (2016)
pubmed / 日本語要約
 吉田
       
   5/20 Vea IM, Tanaka S, Shiotsuki T, Jouraku A, Tanaka T, Minakuchi C.
Differential Juvenile Hormone Variations in Scale Insect Extreme Sexual Dimorphism.
PLoS One. 2016 Feb 19;11(2):e0149459. doi: 10.1371/journal.pone.0149459. eCollection 2016.
pubmed / 日本語要約
中畑
       
   5/20     Kang J, Hu J, Karra R, Dickson AL, Tornini VA, Nachtrab G, Gemberling M, Goldman JA, Black BL, Poss KD
Modulation of tissue repair by regeneration enhancer elements
Nature. 2016 Apr 14;532(7598):201-6. doi: 10.1038/nature17644. Epub 2016 Apr 6
pubmed / 日本語要約
 田島
       
   5/13         Bielmeier C, Alt S, Weichselberger V, La Fortezza M, Harz H, Julicher F, Salbreux G, Classen AK.
Interface Contractility between Differently Fated Cells Drives Cell Elimination and Cyst Formation.
Curr Biol. 2016 Mar 7;26(5):563-74.
pubmed / 日本語要約
 山路
       
   5/13 Shimono K, Fujishima K, Nomura T, Ohashi M, Usui T, Kengaku M, Toyoda A, Uemura T
An evolutionarily conserved protein CHORD regulates scaling of dendritic arbors with body size
Scientific Reports 4:4415 (2014)
pubmed / 日本語要約
 笹倉
       
   4/22



   
Davies B, Hatton E, Altemose N, Hussin JG, Pratto F, Zhang G, Hinch AG, Moralli D, Biggs D, Diaz R, Preece C, Li R, Bitoun E, Brick K, Green CM, Camerini-Otero RD, Myers SR, Donnelly P.
Re-engineering the zinc fingers of PRDM9 reverses hybrid sterility in mice.
Nature. 2016 Feb 11;530(7589):171-6
pubmed / 日本語要約
 保住
       
   4/22  
Nishimura T, Sato T, Yamamoto Y, Watakabe I, Ohkawa Y, Suyama M, Kobayashi S, Tanaka M.
foxl3 is a germ cell-intrinsic factor involved in sperm-egg fate decision in medaka.
Science. (2015) 349,328-31.
pubmed / 日本語要約
 三田
       
   4/15 Jun Nakamura, Akira Tetsukawa and Shigeki Fujiwara
Chondroitin 4-O-sulfotransferases are required for cell adhesion and morphogenesis in the Ciona intestinalis embryo
Develop. Growth Differ. (2015) 57, 58–67
pubmed / 日本語要約

 松延
       
  4/15
Claudio Araya, Carlos Carmona-Fontaine, and Jonathan D.W. Clarke
Extracellular matrix couples the convergence movement of mesoderm and neural plate during the early stages of neurulation.
Dev Dyn. 2016 Mar 2. doi: 10.1002/dvdy.24401.
pubmed / 日本語要約

 田島
       
   4/15     Goolam, M., Scialdone, A., Graham, S.J.L., Macaulay, I.C., Jedrusik, A., Hupalowska, A., Voet, T., Marioni, J.C. and Zernicka-Goetz, M.
Heterogeneity in Oct4 and Sox2 targets biases cell fate in 4-cell mouse embryos.
Cell 165, 61-74 (2016)
pubmed / 日本語要約
 吉田
     
   4/8     Baena-López LA1, Baonza A, García-Bellido A.The Orientation of Cell Division Determines the Shape of Drosophila Organs
Current Biology, Vol. 15, 1640-1644, 2005
pubmed / 日本語要約
 山路
       
   4/1 Choi J, Suzuki KT, Sakuma T, Shewade L, Yamamoto T, Buchholz DR.
Unliganded thyroid hormone receptor α regulates developmental timing via gene repression in Xenopus tropicalis.
Endocrinology. 2015 Feb;156(2):735-44.
pubmed / 日本語要約
中畑
       
   3/4 Subramaniam G, Campsteijn C, Thompson EM.
Lifespan Extension in a Semelparous Chordate Occurs via Developmental Growth Arrest Just Prior to Meiotic Entry
PLoS One. 2014 Apr
pubmed / 日本語要約
藤野
       
   3/4 Shimada-Niwa Y, Niwa R.
Serotonergic neurons respond to nutrients and regulate the timing of steroid hormone biosynthesis in Drosophila
Nature Communications 6778 (2014)
pubmed / 日本語要約
笹倉
       
   2/19 Abdul-Wajid S, Veeman MT, Chiba S, Turner TL, Smith WC.
Exploiting the extraordinary genetic polymorphism of Ciona for developmental genetics with whole genome sequencing.
Genetics 197,49-59 (2014)
pubmed / 日本語要約
三田
       
   2/12 Farley EK, Olson KM, Zhang W, Brandt AJ, Rokhsar DS, Levine MS.
Suboptimization of developmental enhancers.
Science 350, 325-328 (2015)
pubmed / 日本語要約
吉田
       
   2/12 Crocker J, Abe N, Rinaldi L, McGregor AP, Frankel N, Wang S, Alsawadi A, Valenti P, Plaza S, Payre F, Mann RS, Stern DL.
Low Affinity Binding Site Clusters Confer Hox Specificity and Regulatory Robustness.
Cell. 2015 Jan 15;160(1-2):191-203.
pubmed / 日本語要約
保住
       
   2/5 Herriges JC, Verheyden JM, Zhang Z, Sui P, Zhang Y, Anderson MJ, Swing DA, Zhang Y, Lewandoski M, Sun X.
FGF-Regulated ETV Transcription Factors Control FGF-SHH Feedback Loop in Lung Branching
Developmental Cell, Volume 35, Issue 3, 9 November 2015, Pages 322–332
pubmed / 日本語要約
山路
       
   2/5 Maruyama D, Völz R, Takeuchi H, Mori T, Igawa T, Kurihara D, Kawashima T, Ueda M, Ito M, Umeda M, Nishikawa S, Groß-Hardt R, Higashiyama T.
Rapid Elimination of the Persistent Synergid through a Cell Fusion Mechanism
Cell. 161 (4). 2015
pubmed / 日本語要約
松延
       
   1/22 Masato Yoshizawa and Willian R. Jeffery
Shadow response in the blind cavefish Astyanax reveals conservation of functional pineal eye
J Exp Biol. 2008 February ; 211 : 292-299.
pubmed / 日本語要約
石塚
       
   1/22
William R. Jeffery, Allen G. Strickler & Yoshiyuki Yamamoto
Migratory neural crest-like cells form body pigmentation in a urochordate embryo
Nature VOL431 7 October 2004 696-699
pubmed / 日本語要約
田島
       
   1/15 Cota CD, Davidson B.
Mitotic membrane turnover coordinates differential induction of the heart progenitor lineage
Developmental Cell 34, 505-519
pubmed / 日本語要約
笹倉
       
   1/15
Vidal B, Santella A, Serrano-Saiz E, Bao Z, Chuang CF, Hobert O.
C. elegans SoxB genes are dispensable for embryonic neurogenesis but required for terminal differentiation of specific neuron types
Development. 2015 Jul
pubmed / 日本語要約

藤野
       
   1/8 Kayukawa T, Murata M, Kobayashi I, Muramatsu D, Okada C, Uchino K, Sezutsu H, Kiuchi M, Tamura T, Hiruma K, Ishikawa Y, Shinoda T.
Hormonal regulation and developmental role of Kruppel homolog 1, a repressor of metamorphosis, in the silkworm Bombyx mori.
Dev Biol. 2014 Apr 1;388(1):48-56.
pubmed / 日本語要約
中畑
       
   1/8 Schmoller KM, Turner JJ, Kõivomägi M, Skotheim JM.
Dilution of the cell cycle inhibitor Whi5 controls budding-yeast cell size.
Nature (2015) 526, 268-272.
pubmed / 日本語要約
三田
       
       
   

2015年

 
  日程 論文 担当者
   12/11
Rossi A, Kontarakis Z, Gerri C, Nolte H, Hölper S, Krüger M, Stainier DY.
Genetic compensation induced by deleterious mutations but not gene knockdowns.
Nature 524, 230-233 (2015)
pubmed / 日本語要約
吉田
       
   12/11
Sammut M, Cook SJ, Nguyen KC, Felton T, Hall DH, Emmons SW, Poole RJ, Barrios A.
Glia-derived neurons are required for sex-specific learning in C. elegans
Nature. 2015 Oct 15;526(7573):385-90.
pubmed / 日本語要約
保住
       
   11/13 Hashimoto H, Robin FB, Sherrard KM, Munro EM.
Sequential Contraction and Exchange of Apical Junctions Drives Zippering and Neural Tube Closure in a Simple Chordate
Developmental Cell 32, 241-255, 2015
pubmed / 日本語要約
松延
       
   11/13 Veeman MT, Nakatani Y, Hendrickson C, Ericson V, Lin C, Smith WC.
chongmague reveals an essential role for laminin-mediated boundary formation in chordate convergence and extension movements
Development 2008 135: 33-41; doi: 10.1242/dev.010892
pubmed / 日本語要約
山路
       
   11/6
Lesser MP, Carleton KL, Böttger SA, Barry TM, Walker CW.
Sea urchin tube feet are photosensory organs that express a rhabdomeric-like opsin and PAX6
The Royal Society(2011)  78, 3371-3379
pubmed / 日本語要約
石塚
       
   11/6
Liu Z, Yang CP, Sugino K, Fu CC, Liu LY, Yao X, Lee LP, Lee T.
Opposing intrinsic temporal gradients guide neural stem cell production of varied neuronal fates
Science VOL350 ISSUE6258
pubmed / 日本語要約
田島
       
   10/23 Hamada M, Goricki S, Byerly MS, Satoh N, Jeffery WR.
Evolution of the chordate regeneration blastema: Differential gene expression and conserved role of notch signaling during siphon regeneration in the ascidian Ciona.
Dev Biol. 2015 Sep.
pubmed / 日本語要約
藤野
       
   10/23 Sato A., Satoh N., Bishop J.D.D.
Field identification of 'types' A and B of the ascidian Ciona intestinalis in a region of sympatry.
Mar Biol. (2012) 159, 1611-1619.
日本語要約
三田
       
   10/9 Abitua PB, Gainous TB, Kaczmarczyk AN, Winchell CJ, Hudson C, Kamata K, Nakagawa M, Tsuda M, Kusakabe TG, Levine M.
The pre-vertebrate origins of neurogenic placodes.
Nature 524, 462-465 (2015)
pubmed / 日本語要約
吉田
       
   10/9 Holleley CE, O'Meally D, Sarre SD, Marshall Graves JA, Ezaz T, Matsubara K, Azad B, Zhang X, Georges A.
Sex reversal triggers the rapid transition from genetic to temperature-dependent sex
2 JULY 2015 | VOL 523 | NATURE | 79
保住
       
   9/15 Matsubayashi Y, Ebisuya M, Honjoh S, Nishida E.
ERK Activation Propagates in Epithelial Cell Sheets and Regulates Their Migration during Wound Healing,
Current Biology Volume14 issue8, 20 April 2004, page731-735
山路
   
 
   9/15 Kidoya H, Naito H, Muramatsu F, Yamakawa D, Jia W, Ikawa M, Sonobe T, Tsuchimochi H, Shirai M, Adams RH, Fukamizu A, Takakura N.
APJ Regulates Parallel Alignment of Arteries and Veins in the Skin
Developmental Cell 33, 247-259 (2015)
松延
       
   9/8 Tsuda M, Sakurai D, Goda M.
Direct evidence for the role of pigment cells in the brain of ascidian larvae by laser ablation
The Journal of Experimental Biology 206, 1409-1417(2003)
石塚
       
   9/8 Kourakis MJ, Reeves W, Newman-Smith E, Maury B, Abdul-Wajid S, Smith WC.
A one-dimensional model of PCP signaling: Polarized cell behavior in the notochord of the ascidian Ciona
Developmental Biology 395 (2014) 120-130
田島
       
   8/28
Mizotani Y, Itoh S, Hotta K, Tashiro E, Oka K, Imoto M.
Evaluation of drug toxicity profiles based on the phenotypes of ascidian Ciona intestinalis
Biochemical and Biophysical Research Communications Volume 463, Issue 4, 7 August 2015, Pages 656–660
中畑
       
   8/28 Huettl RE, Eckstein S, Stahl T, Petricca S, Ninkovic J, Götz M, Huber AB.
Functional dissection of the Pax6 paired domain: Roles in neural tube patterning and peripheral nervous system development
Dev Biol. 2015 Jul
藤野
       
   7/3 Gline S, Kaplan N, Bernadskaya Y, Abdu Y, Christiaen L.
Surrounding tissues canalize motile cardiopharyngeal progenitors towards collective polarity and directed migration.
Development. 2015 Feb 1;142(3):544-54. doi: 10.1242/dev.115444. Epub 2015
Jan 6.
保住
       
   7/3 Developmental genetic bases behind the independent origin of the tympanic membrane in mammals and diapsids.
Nature Communications. 2015 Apr 22;6:6853.
Kitazawa T, Takechi M, Hirasawa T, Adachi N, Narboux-Nême N, Kume H, Maeda K, Hirai T, Miyagawa-Tomita S, Kurihara Y, Hitomi J, Levi G, Kuratani S, Kurihara H.
三田
       
   6/19 Eri R, Arnold JM, Hinman VF, Green KM, Jones MK, Degnan BM, Lavin MF.
Hemps, a novel EGF-like protein, plays a central role in ascidian metamorphosis
Development 126, 5809-5818 (1999)
山路
       
   6/19 Byri S, Misra T, Syed ZA, Bätz T, Shah J, Boril L, Glashauser J, Aegerter-Wilmsen T, Matzat T, Moussian B, Uv A, Luschnig S.
The triple-repeat protein Anakonda controls epithelial tricellular junction formation in Drosophila.
Developmental Cell 33, 535-548 (2015)
吉田
       
   6/12 Inada K, Horie T, Kusakabe T, Tsuda M.
Targeted knockdown of an opsin gene inhibits the swimming behavior photoresponse of ascidian larvae
Neuroscience Letters 347(2003) 167-170
石塚
       
   6/12 Di-Poï N, Montoya-Burgos JI, Miller H, Pourquié O, Milinkovitch MC, Duboule D.
Changes in Hox genes’ structure and function during the evolution of the squamate body plan
Nature 464,99-104 (2010)
田島
       
   5/29 Hatton AR, Subramaniam V, Lopez AJ.
Generation of alternative ultrabithorax isoforms and stepwise removal of a large intron by resplicing at exon-exon juntions.
Molecular Cell 2, 787-796 (1998)
笹倉
       
   5/22 Hudson C, Sirour C, Yasuo H.
Snail mediates medial-lateral patterning of the ascidian neural plate
Dev Biol. 2015 May 8.
松延
       
   5/22 Youhei Washio, Yuichiro Fujinami, Daisuke Shimizu, Hayato Yokoi, Tohru Suzuki
Exposure to oxidative by-products during metamorphosis affects pigmentation patterns in flounder, Paralichthys olivaceus
Aquaculture Volume 435, 1 January 2015, Pages 318–327
中畑
       
   5/15 Nishida H, Sawada K.
Nature 409, 724-729 (2001)
macho-1 encodes a localized mRNA in ascidian eggs that specifies muscle fate during embryogenesis.
三田
       
   5/15 P Theotokis, Kleopa KA, Touloumi O, Lagoudaki R, Lourbopoulos A, Nousiopoulou E, Kesidou E, Poulatsidou KN, Dardiotis E, Hadjigeorgiou G, Karacostas D, Cifuentes-Diaz C, Irinopoulou T, Grigoriadis N.
Connexin43 and connexin47 alterations after neural precursor cells transplantation in experimental autoimmune encephalomyelitis
Glia. 2015 Apr 27.
藤野
       
   5/8 Picco V, Hudson C, Yasuo H.
Ephrin-Eph signaling drives the asymmetric division of notochord/neural precursors in Ciona embryos
Development 134, 1491-1497 (2007)
笹倉
       
   5/8 Bothma JP et al
Dynamic regulation of eve stripe 2 expression reveals transcriptional bursts in living Drosophila embryos.
PNAS 111:10598-10603 (2014)
堀江
       
   5/1 Davidson, B, Shi, W, Beh, J, Christiaen, L and Levine, M.
FGF signaling delineates the cardiac progenitor field in the simple chordate, Ciona intestinalis.
Genes Dev. 2006 Oct 1;20(19):2728-38.
吉田
       
   5/1 Metzger MJ, Reinisch C, Sherry J, Goff SP.
Horizontal Transmission of Clonal Cancer Cells Causes Leukemia in Soft-Shell Clams.
Cell. 2015 Apr 9;161(2):255-63.
保住
       
   4/24 Rigon F, Stach T, Caicci F, Gasparini F, Burighel P, Manni L
Evolutionary diversification of secondary mechanoreceptor cells in tunicata.
BMC Evol Biol. 2013 Jun 4;13:112.
藤野
   
 
   4/24 Watanabe H, Schmidt HA, Kuhn A, Höger SK, Kocagöz Y, Laumann-Lipp N, Ozbek S, Holstein TW.
Nodal signaling determines biradial asymmetery in Hidra
Nature. 2014 Nov 6;515(7525):112-5.
松延
   
 
   4/24 Di Bella MA, Carbone MC, De Leo G.
Ultrastructural aspects of naturally occurring wound in the tunic of two ascidians: Ciona intestinalis and Styela plicata (Tunicata)
Micron. 2015 Feb;69:6-14.
中畑
       
   4/17 Porazinski S, Wang H, Asaoka Y, Behrndt M, Miyamoto T, Morita H, Hata S, Sasaki T, Krens SF, Osada Y, Asaka S, Momoi A, Linton S, Miesfeld JB, Link BA, Senga T, Castillo-Morales A, Urrutia AO, Shimizu N, Nagase H, Matsuura S, Bagby S, Kondoh H, Nishina H, Heisenberg CP, Furutani-Seiki M.
YAP is essential for tissue tension to ensure vertebrate 3D body shape
Nature. 2015 Mar 16.
三田
       
   4/10 Chen WC, Pauls S, Bacha J, Elgar G, Loose M, Shimeld SM.
Dissection of a Ciona regulatory element reveals complexity of cross-species
enhancer activity
Dev Biol. 2014 Jun 15;390(2):261-72.
保住
       
   4/10 Xu HJ, Xue J, Lu B, Zhang XC, Zhuo JC, He SF, Ma XF, Jiang YQ, Fan HW, Xu JY, Ye YX, Pan PL, Li Q, Bao YY, Nijhout HF, Zhang CX.
Two insulin receptors determine alternative wing morphs in planthoppers
Nature. 2015 Mar 26;519(7544):464-7.
笹倉
       
   4/3 Kumano G, Negoro N, Nishida H.
Transcription factor Tbx6 plays a central role in fate determination between mesenchyme and muscle in embryos of the ascidian, Halocynthia roretzi.
Development, Growth and Differenciation. (2014) 56, 310-322.
松延
       
   4/3 Acosta H, Iliev D, Grahn TH, Gouignard N, Maccarana M, Griesbach J, Herzmann S, Sagha M, Climent M, Pera EM.
The serpin PN1 is a feedback regulator of FGF signaling in germ layer and primary axis formation.
Development 142, 1146-1158 (2015)
吉田
       
   3/27 Hara K, Fujiwara S, Kawamura K.
Retinoic acid can induce a secondary axis in developing buds of a colonial ascidian, Polyandrocarpa misakiensis.
Dev. Growth Differ. (1992) 34, 437-445.
 三田
       
   3/27 Haile Y, Nakhaei-Nejad M, Boakye PA, Baker G, Smith PA, Murray AG, Giuliani F, Jahroudi N.
Reprogramming of HUVECs into Induced Pluripotent Stem Cells (HiPSCs), Generation and Characterization of HiPSC-Derived Neurons and Astrocytes
Plos One. March 2015
藤野
       
   3/20 Kumano G, Kawai N, Nishida H
Macho-1 regulates unequal cell divisions independently of its function as a muscle determinant
Dev Biol. 2010 Aug 1;344(1):284-92.
pubmed
 Nicolas
       
   3/20 Manzon LA, Youson JH, Holzer G, Staiano L, Laudet V, Manzon RG.
Thyroid hormone and retinoid X receptor function and expression during
sea lamprey (Petromyzon marinus) metamorphosis
Gen Comp Endocrinol. 2014 Aug 1;204:211-22.
 中畑
       
   3/10 Han J, Kim D, Morris KV.
Promoter-associated RNA is required for RNA-directed transcriptional gene silencing in human cells.
Proc Natl Acad Sci USA. 2007 Jul 24;104(30):12422-7.
 佐藤
       
   2/27 Roure A, Lemaire P, Darras S.
An Otx/Nodal Regulatory Signature for Posterior Neural Development in Ascidians
PLoS Genet. 2014 Aug; 10(8)
 保住
       
   2/20
Jeffery WR.
Closing the wounds: One hundred and twenty five years of regenerative biology in the ascidian Ciona intestinalis
Genesis. 2015 Jan;53(1):48-65.
 笹倉
       
   2/20
Susor A, Jansova D, Cerna R, Danylevska A, Anger M, Toralova T, Malik R, Supolikova J, Cook MS, Oh JS, Kubelka M.
Temporal and spatial regulation of translation in the mammalian oocyte via the mTOR-eIF4F pathway
Nat Commun. 2015 Jan 28;6:6078.
 飯塚
       
   2/13
Yamazaki D, Horiuchi J, Ueno K, Ueno T, Saeki S, Matsuno M, Naganos S, Miyashita T, Hirano Y, Nishikawa H, Taoka M, Yamauchi Y, Isobe T, Honda Y, Kodama T, Masuda T, Saitoe M.
Glial dysfunction causes age-related memory impairment in Drosophila.
Neuron. 2014 Nov 19;84(4):753-63.
松延
       
   1/30
Kourakis MJ, Reeves W, Newman-Smith E, Maury B, Abdul-Wajid S, Smith WC.
A one-dimensional model of PCP signaling: polarized cell behavior in the notochord of the ascidian Ciona
Dev Biol. 2014 Nov 1;395(1):120-30.

 佐藤

       
   1/30
Kok FO, Shin M, Ni CW, Gupta A, Grosse AS, van Impel A, Kirchmaier BC, Peterson-Maduro J, Kourkoulis G, Male I, DeSantis DF, Sheppard-Tindell S, Ebarasi L, Betsholtz C, Schulte-Merker S, Wolfe SA, Lawson ND.
Reverse Genetic Screening Reveals Poor Correlation between Morpholino-Induced and Mutant Phenotypes in Zebrafish.
Dev Cell. 2015 Jan 12;32(1):97-108.

 吉田

       
   1/23
Mayzel B, Haber M, Ilan M.
Chemical Defense Against Fouling in the Solitary Ascidian Phallusia nigra.
Biol Bull. 2014 Dec;227(3):232-41.

 飯塚

       
   1/23
Heliconius Genome Consortium.
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species.
Nature. 2012 Jul 5;487(7405):94-8.

 Nicholas

       
   1/16
Medina BN, Santos de Abreu I, Cavalcante LA, Silva WA, da Fonseca RN, Allodi S, de Barros CM.
3-acetylpyridine-induced degeneration in the adult ascidian neural complex: Reactive and regenerative changes in glia and blood cells.
Dev Neurobiol. 2014 Dec 6. doi: 10.1002/dneu.22255.

 藤野

       
   1/16
Shang Y, Ma Y, Zhou Y, Zhang H, Duan L, Chen H, Zeng J, Zhou Q, Wang S, Gu W, Liu M, Ren J, Gu X, Zhang S, Wang Y, Yasukawa K, Bouwmeester HJ, Qi X, Zhang Z, Lucas WJ, Huang S.
Biosynthesis, regulation, and domestication of bitterness in cucumber
Science. 2014 Nov 28;346(6213):1084-8.

 三田

     

2014年

 
  日程 論文 担当者
   12/19
Kawaguchi A, Utsumi N, Morita M, Ohya A, Wada S.
Application of the cis-regulatory region of a heat-shock protein 70 gene to heat-inducible gene expression in the ascidian Ciona intestinalis.
Genesis. 2014 Nov 4. doi: 10.1002/dvg.22834.

 松延

       
   12/19
Sugiyama S, Di Nardo AA, Aizawa S, Matsuo I, Volovitch M, Prochiantz A, Hensch TK.
Experience-dependent transfer of Otx2 homeoprotein into the visual cortex activates postnatal plasticity.
Cell. 2008 Aug 8;134(3):508-20.

 保住

       
   11/14
Kishi K, Onuma TA, Nishida H.
Long-distance cell migration during larval development in the appendicularian, Oikopleura dioica.
Dev Biol. 2014 Nov 15;395(2):299-306.

 吉田

   
 
   11/14
Baird NA, Douglas PM, Simic MS, Grant AR, Moresco JJ, Wolff SC, Yates JR 3rd, Manning G, Dillin A.
HSF-1-mediated cytoskeletal integrity determines thermotolerance and life span.
Science. 2014 Oct 17;346(6207):360-3.

 笹倉

       
   11/7
Stolfi A, Lowe EK, Racioppi C, Ristoratore F, Brown CT, Swalla BJ, Christiaen L.
Divergent mechanisms regulate conserved cardiopharyngeal development and gene expression in distantly related ascidians
Elife. 2014 Sep 10;3:e03728.

 Nicholas

       
   11/7
Maeng S, Lee JH, Choi SC, Kim MA, Shin YK, Sohn YC.
The retinoid X receptor in a marine invertebrate chordate: evolutionary insights from urochordates.
Gen Comp Endocrinol. 2012 Sep 1;178(2):380-90.

 中畑

       
   10/17
Ohtsuka Y, Matsumoto J, Katsuyama Y, Okamura Y
Nodal signaling regulates specification of ascidian peripheral neurons through control of the BMP signal.
Development. 2014 Oct;141(20):3889-99.
 三田
       
   10/17
Wang T, Wang SW, Zhang Y, Wu XF, Peng Y, Cao Z, Ge BY, Wang X, Wu Q, Lin JT, Zhang WQ, Li S, Zhao J.
Scorpion venom heat-resistant peptide (SVHRP) enhances neurogenesis and neurite outgrowth of immature neurons in adult mice by up-regulating brain-derived neurotrophic factor (BDNF).
PLoS One. 2014 Oct 9;9(10):

 藤野

       
   9/19
Nakajo K, Nishino A, Okamura Y, Kubo Y.
KCNQ1 subdomains involved in KCNE modulation revealed by an invertebrate KCNQ1 orthologue.
J Gen Physiol. 2011 Nov;138(5):521-35.
 保住
       
   9/19
Gingold H, Tehler D, Christoffersen NR, Nielsen MM, Asmar F, Kooistra SM, Christophersen NS, Christensen LL, Borre M, Sørensen KD, Andersen LD, Andersen CL, Hulleman E, Wurdinger T, Ralfkiær E, Helin K, Grønbæk K, Orntoft T, Waszak SM, Dahan O, Pedersen JS, Lund AH, Pilpel Y.
A dual program for translation regulation in cellular proliferation and differentiation.
Cell. 2014 Sep 11;158(6):1281-92.

 Alla

       
    9/9 Wagner E, Stolfi A, Gi Choi Y, Levine M.
Islet is a key determinant of ascidian palp morphogenesis.
Development. 2014 Aug;141(15):3084-92.
 笹倉
       
    9/9
Malone CD, Mestdagh C, Akhtar J, Kreim N, Deinhard P, Sachidanandam R, Treisman J, Roignant JY.
The exon junction complex controls transposable element activity by ensuring faithful splicing of the piwi transcript.
Gene & Development 2014 Aug 15;28(16):1786-99.
 飯塚
       
    7/29 Liberti A, Melillo D, Zucchetti I, Natale L, Dishaw LJ, Litman GW, De Santis R, Pinto MR.
Expression of Ciona intestinalis variable region-containing chitin-binding proteins during development of the gastrointestinal tract and their role in host-microbe interactions.
PLoS One. 2014 May 2;9(5):e94984.
 中畑
       
    7/22 Seth M, Shirayama M, Gu W, Ishidate T, Conte D Jr, Mello CC.
The C. elegans CSR-1 argonaute pathway counteracts epigenetic silencing to promote germline gene expression.
Dev Cell. 2013 Dec 23;27(6):656-63.
 佐藤
       
    7/8 Okuyama T, Yokoi S, Abe H, Isoe Y, Suehiro Y, Imada H, Tanaka M, Kawasaki T, Yuba S, Taniguchi Y, Kamei Y, Okubo K, Shimada A, Naruse K, Takeda H, Oka Y, Kubo T, Takeuchi H.
A neural mechanism underlying mating preferences for familiar individuals in medaka fish.
Science. 2014 Jan 3;343(6166):91-4.
 松延
       
    7/1 Pezzotti MR, Locascio A, Racioppi C, Fucci L, Branno M.
Auto and cross regulatory elements control Onecut expression in the ascidian nervous system.
Dev Biol. 2014 Jun 15;390(2):273-287.
 藤野
       
    7/1 Cooper KL, Sears KE, Uygur A, Maier J, Baczkowski KS, Brosnahan M, Antczak D, Skidmore JA, Tabin CJ.
Patterning and post-patterning modes of evolutionary digit loss in mammals.
Nature. 2014 Jul 3;511(7507):41-5.
 吉田
       
    6/17 Sasaki N, Ogasawara M, Sekiguchi T, Kusumoto S, Satake H.
Toll-like receptors of the ascidian Ciona intestinalis: prototypes with hybrid functionalities of vertebrate Toll-like receptors.
J Biol Chem. 2009 Oct 2;284(40):27336-43.
 Alla
       
    6/17 Fischer, A. H., Pang, K., Henry, J. Q. & Martindale, M. Q.
A cleavage clock regulates features of lineage-specific differentiation in the development of a basal branching metazoan, the ctenophore Mnemiopsis leidyi.
Evodevo. 2014 Jan 31;5(1):4.
 Nicholas
       
    6/10 Aya Nishiyama and Shigeki Fujiwara
RNA interference by expressing short hairpin RNA in the Ciona intestinalis embryo.
Dev Growth Differ. 2008 Aug;50(6):521-9.
 飯塚
       
    6/10 Takashi Kiuchi, Hikaru Koga, Munetaka Kawamoto, Keisuke Shoji, Hiroki Sakai, Yuji Arai, Genki Ishihara, Shinpei Kawaoka, Sumio Sugano, Toru Shimada, Yutaka Suzuki, Masataka G. Suzuki, Susumu Katsuma
A single female-specific piRNA is the primary determiner of sex in the silkworm.
Nature. 2014 May 29;509(7502):633-6.
 三田
       
    6/3 Stolfi A, Wagner E, Taliaferro JM, Chou S, Levine M.
Neural tube patterning by Ephrin, FGF and Notch signaling relays.
Development. 2011 Dec;138(24):5429-39.
 堀江
       
    6/3 Wu Z, Autry AE, Bergan JF, Watabe-Uchida M, Dulac CG.
Galanin neurons in the medial preoptic area govern parental behaviour.
Nature. 2014 May 15;509(7500):325-30.
 保住
       
    5/13 Vincent Bertrand, Clare Hudson, Danielle Caillol, Cornel Popovici and Patrick Lemaire
Neural tissue in ascidian embryos is induced by FGF9/16/20, acting via a combination of maternal GATA and Ets transcription factors.
Cell. 2003 Nov 26;115(5):615-27.
 吉田
       
    5/13 Ureña E, Manjón C, Franch-Marro X, Martín D.
Transcription factor E93 specifies adult metamorphosis in hemimetabolous and holometabolous insects.
PNAS. 2014 May 13;111(19):7024-9.
 笹倉
       
    4/15 Kristina S. Sinsimer, Jack J. Lee, Stephan Y. Thiberge, and Elizabeth R. Gavis
Germ Plasm Anchoring Is a Dynamic State that Requires Persistent Trafficking
Cell Reports, Volume 5, Issue 5, p1169-1177, 12 December 2013
佐藤 
       
    4/1 Tagawa K, Jeffery WR, Satoh N.
The recently-described ascidian species Molgula tectiformis is a direct developer.
Zoological Science, 1997 Apr;14(2):297-303.
  Nicholas
       
    4/1 Fuchs B, Wang W, Graspeuntner S, Li Y, Insua S, Herbst EM, Dirksen P, Böhm AM, Hemmrich G, Sommer F, Domazet-Lošo T, Klostermeier UC, Anton-Erxleben F, Rosenstiel P, Bosch TC, Khalturin K.
Regulation of Polyp-to-Jellyfish Transition in Aurelia aurita.
Current Biology 24, 263-273, February 3 , 2014.
 松延
       
    3/25 Kuwajima M, Kumano G, Nishida H.
Regulation of the Number of Cell Division Rounds by Tissue-Specific Transcription Factors and Cdk Inhibitor during Ascidian Embryogenesis.
PLoS One. 2014 Mar 7;9(3):e90188.
 三田
       
    3/25 Youngshik Choe, Konstantinos S. Zarbalis, Samuel J. Pleasure
Neural Crest-Derived Mesenchymal Cells Require Wnt Signaling for Their Development and Drive Invagination of the Telencephalic Midline.
PLoS One. 2014 Feb.
 藤野
       
    3/4 Katikala L, Aihara H, Passamaneck YJ, Gazdoiu S, José-Edwards DS, Kugler JE, Oda-Ishii I, Imai JH, Nibu Y, Di Gregorio A.
Functional Brachyury Binding Sites Establish a Temporal Read-out of Gene Expression in the Ciona Notochord.
PLoS Biol. 2013 Oct;11(10):e1001697.
 保住
       
    3/4 Feng Chen and Mark A. Krasnow
Progenitor Outgrowth from the Niche in Drosophila Trachea Is Guided by FGF from Decaying Branches
Science. 2014 Jan 10;343(6167):186-9
 小椋
       
    2/25
Suzuki MM, Kerr AR, De Sousa D, Bird A.
CpG methylation is targeted to transcription units in an invertebrate genome.
Genome research 2007 May;17(5):625-31.
 笹倉
       
    2/25 Wangxiong Hu, Tingzhang Wang, Jianhong Xu, Hongzhi Li
MicroRNA mediates DNA methylation of target genes
Biochemical and Biophysical Research Communications, 20 January 2014
 飯塚
       
    2/18 Omotezako T, Nishino A, Onuma TA, Nishida H.
RNA interference in the appendicularian Oikopleura dioica reveals the function of the Brachyury gene.
Dev Genes Evol. 2013 Jul;223(4):261-7.
佐藤
       
    2/18 Ryuji Hiramatsu, Toshiki Matsuoka, Chiharu Kimura-Yoshida, Sung-Woong Han, Kyoko Mochida, Taiji Adachi, Shuichi Takayama, Isao Matsuo
External mechanical cues trigger the establishment of the anterior-posterior axis in early mouse embryos.
Developmental Cell 27, 131-144 (2013) 
吉田
       
 
  1/28
Andrea Pasini, Raoul Manenti, Ute Rothbacher, Patrick Lemaire.
Antagonizing Retinoic Acid and FGF/MAPK Pathways Control Posterior Body Patterning in the Invertebrate Chordate Ciona intestinalis
PLoS ONE. 2012; 7(9):e46193
 松延
   

 
    1/28
Alexandre, C., Baena-Lopez, A. & Vincent, J.-P.
Patterning and growth control by membrane-tethered Wingless.
Nature 505, 180–185 (2014). 
  Nicholas
   

2013年

 
  日程 論文 担当者
    12/24
Ikeda T, Matsuoka T, Satou Y.
A time delay gene circuit is required for palp formation in the ascidian embryo.
Development (2013) 140, 4703-4708 
 佐々木
       
    12/24
Hansen TB, Jensen TI, Clausen BH, Bramsen JB, Finsen B, Damgaard CK, Kjems J.
Natural RNA circles function as efficient microRNA sponges.
Nature. 2013 Mar 21;495(7441):384-8. 
 三田
       
    12/17
Squarzoni P, Parveen F, Zanetti L, Ristoratore F, Spagnuolo A.
FGF/MAPK/Ets signaling renders pigment cell precursors competent to respond to Wnt signal by directly controlling Ci-Tcf transcription.
Development. 2011 Apr;138(7):1421-32. 
 藤野
       
    12/17
Ren J, Qin C, Hu F, Tan J, Qiu L, Zhao S, Feng G, Luo M.
Habenula "cholinergic" neurons co-release glutamate and acetylcholine and activate postsynaptic neurons via distinct transmission modes.
Neuron 69, 445.452, February 10, 2011 
 保住
       
    11/19
Kumano G, Takatori N, Negishi T, Takada T, Nishida H.
A maternal factor unique to ascidians silences the germline via binding to P-TEFb and RNAP II regulation.
Curr Biol. 2011 Aug 9
 飯塚
       
    11/19
Futahashi R, Kurita R, Mano H, Fukatsu T.
Redox alters yellow dragonflies into red.
PNAS 109, 12626-12631, 2012.
笹倉
       
    10/29
Pasini A, Amiel A, Rothbächer U, Roure A, Lemaire P, Darras S.
Formation of the ascidian epidermal sensory neurons: insights into the origin of the chordate peripheral nervous system.
PLoS Biol. 2006 Jul;4(7):e225.
 小椋
       
    10/29
Masaki Shirayama, Meetu Seth, Heng-Chi Lee, Weifeng Gu, Takao Ishidate, Darryl Conte, Jr. and Craig C. Mello
piRNAs Initiate an Epigenetic Memory of Nonself RNA in the C.elegans Germline
Cell 150, 65-77, July 6, 2012
 佐藤
       
    10/15
Haupaix N, Stolfi A, Sirour C, Picco V, Levine M, Christiaen L, Yasuo H.
p120RasGAP mediates ephrin/Eph-dependent attenuation of FGF/ERK signals during cell fate specification in ascidian embryos.
Development (2013) Sep 25.
 三田
       
    9/20
Atsushi Kubo, Nobuhiro Suzuki, Xuyang Yuan, Kenta Nakai, Nori Satoh, Kaoru S. Imai and Yutaka Satou
Genomic cis-regulatory networks in the early Ciona intestinalis embryo
Development 137, 1613-1623 (2010)

 Nicholas

       
    9/20
G. Shohat-Ophir, K. R. Kaun, R. Azanchi and U. Heberlein
Sexual Deprivation Increases Ethanol Intake in Drosophila.
Science 335, 1351 (2012)

 松延

       
    9/13
Naohito Takatori, Gaku Kumano, Hidetoshi Saiga, and Hiroki Nishida
Segregation of Germ Layer Fates by Nuclear Migration-Dependent Localization of Not mRNA.
Dev. Cell 19, 589-598 (2010)
 吉田
       
     9/13
Yoshihiko Umesono, Junichi Tasaki, Yui Nishimura, Martina Hrouda, Eri Kawaguchi, Shigenobu Yazawa, Osamu Nishimura, Kazutaka Hosoda, Takeshi Inoue, Kiyokazu Agata
The molecular logic for planarian regeneration along the anterior–posterior axis.
Nature vol500 73-76 2013
 佐々木
       
    7/19 Tbx2/3 is an essential mediator within the Brachyury gene network during Ciona notochord development
Development 140, 2422-2433 (2013)
pubmed / 日本語要約
 保住
       
    7/19 Molofsky AV, Glasgow SM, Chaboub LS, Tsai HH, Murnen AT, Kelley KW, Fancy SP, Yuen TJ, Madireddy L, Baranzini S, Deneen B, Rowitch DH, Oldham MC.
Expression profiling of Aldh1l1-precursors in the developing spinal cord reveals glial lineage-specific genes and direct Sox9-Nfe2l1 interactions.
Glia. 2013 Jul 10.
pubmed / 日本語要約
 藤野
       
     7/5 Stephanie A. Izzi et al
Functional studies of the Ciona intestinalis myogenic regulatory factor reveal conserved features of chordate myogenesis
Developmental Biology 376 (2013) 213–223
pubmed / 日本語要約
 佐々木
       
     7/5 Farrell JA, O'Farrell PH.
Mechanism and regulation of Cdc25/Twine protein destruction in embryonic cell-cycle remodeling.
Curr Biol. 2013 Jan 21;23(2):118-126.
pubmed / 日本語要約
   小椋
       
     6/21
Fangfang Lai , Amar Singh and Mary Lou King
Xenopus Nanos1 is required to prevent endoderm expression and apoptosis in primordial germ cells
Development 139, 1476-1486 (2012)
 飯塚
       
     6/14 Bo Dong, Wei Deng and Di Jiang
Distinct cytoskeleton populations and extensive crosstalk control Ciona notochord tubulogenesis
Development 138, 1631-1641(2011)
pubmed / 日本語要約
 佐藤
       
     6/14 β-catenin-driven binary fate specification segregates germ layers in ascidian embryos.
Current Biology 23, 491-495.
pubmed / 日本語要約
 笹倉
       
     6/7 Stefanis Comes, Annamaria Locascio, Francesco Silvestre, Marco d'Ischia, Gian Luigi Russo, Elisabetta Tosti, Margherita Branno and Anna Palumbo
Regulatory roles of nitric oxide during larval development and metamorphosis in Ciona intestinalis
Dev.Biol 306 (2007) 772-784
pubmed / 日本語要約
 松延
       
     6/7 Mounia Lagha, Jacques P. Bothma, Emilia Esposito, Samuel Ng, Laura Stefanik, Chiahao Tsui, Jeffrey Johnston,Kai Chen, David S. Gilmour, Julia Zeitlinger and Michael S. Levine
Paused Pol II Coordinates Tissue Morphogenesis in the Drosophila Embryo.
Cell 153, 976-987 (2013)
pubmed / 日本語要約
 吉田
       
     5/17
Keiko Sakakibara, Sayuri Ando, Hoichong Karen Yip, Yosuke Tamada, Yuji Hiwatashi, Takashi Murata, Hironori Deguchi, Mitsuyasu Hasebe, and John L Bowman
KNOX2 Genes Regulate the Haploid-to-Diploid Morphological Transition in Land Plants
(2013) Science 339:1067–1070.
 Nicholas
       
     5/10
Joyce Tang W, Chen JS, Zeller RW.
Transcriptional regulation of the peripheral nervous system in Ciona intestinalis.
Dev Biol. 2013 Mar 30. doi:pii: S0012-1606(13)00145-0.
 藤野
       
     5/10
Inokuma Y, Yoshioka S, Ariyoshi J, Arai T, Hitora Y, Takada K, Matsunaga S, Rissanen K, Fujita M.
X-ray analysis on the nanogram to microgram scale using porous complexes. Nature. 2013 Mar 28;495(7442):461-6.
 
三田
     4/19 Kourakis MJ, Newman-Smith E, Smith WC.
Key steps in the morphogenesis of a cranial placode in an invertebrate chordate, the tunicate Ciona savignyi.
Dev Biol. 2010 Apr 1;340(1):134-44. doi: 10.1016/j.ydbio.2010.01.016. Epub 2010 Jan 22.
pubmed / 日本語要約
 小椋
       
      4/19 Visualizing Long-Term Memory Formation in Two Neurons of the Drosophila Brain
Science(335) 2012
pubmed / 日本語要約
 保住
       
      4/12 Kimio J. Tanaka, Ken Matsumoto, Masafumi Tsujimoto, and Takahito Nishikata
CiYB1 is a major component of storage mRNPs in ascidian oocytes: implications in translational regulation of localized mRNAs.
Developmental Biology 272 (2004) 217 – 230
pubmed / 日本語要約
 飯塚
       
      4/12 Hwang et al.,
Efficient genome editing in zebrafish using a CRISPR-Cas system.
Nature Biotechnology vol 31, 227-229
pubmed / 日本語要約
 笹倉
       
      3/15 Jennifer Norton, James Cooley, A. F. M. Tariqul Islam, Christina D. Cota and Brad Davidson
Matrix adhesion polarizes heart progenitor induction in the invertebrate chordate Ciona intestinalis.
Development 140, 1301-1311 (2013)
pubmed / 日本語要約
 吉田
       
      3/15 Caghan Kizil et al
Regenerative Neurogenesis from Neural Progenitor Cells Requires Injury-Induced Expression of Gata3
Developmental Cell 23, 1230–1237, December 11, 2012
pubmed / 日本語要約
 佐々木
       
       3/8 Abitua, P. B., Wagner, E., Navarrete, I. A., & Levine, M.
Identification of a rudimentary neural crest in a non-vertebrate chordate.
2012,Nature.
pubmed
   Nicholas
       
       3/8 Katsuki Mukaigasa, Akira Hanasaki, Mitsugu Maeno, Hiroshi Fujii, Shin-ichiro Hayashida, Mari, Itoh, Makoto Kobayashi, Shin Tochinai, Masayuki Hatta, Kazuya Iwabuchi, Masanori Taira, Kazunori Onoe and Yumi Izutsu
The keratin-related Ouroboros proteins function as immune antigens mediating tail regression in Xenopus metamorphosis.
(2009) PNAS.
pubmed / 日本語要約
 松延
       
      2/15 Kawamura K, Kitamura S, Sekida S, Tsuda M, Sunanaga T.
Molecular anatomy of tunicate senescence reversible function of mitochondrial and nuclear genes associated with budding cycles.
Development (2012) 139, 4083-93.
pubmed / 日本語要約
三田
       
      2/15 Hara Y, Nomura T, Yoshizaki K, Frisén J, Osumi N.
Impaired hippocampal neurogenesis and vascular formation in ephrin-A5-deficient mice.
Stem Cells. 2010 May;28(5):974-983.
pubmed / 日本語要約
 藤野
       
     2/8 V Arizza, D Parrinello
Inflammatory hemocytes in Ciona intestinalis innate immune response.
ISJ (Invertebrate Survival Journal) 6: S58-S66, 2009
pubmed / 日本語要約
 保住
       
       2/8 Chuya Shinzato, Eiichi Shoguchi, Takeshi Kawashima, Mayuko Hamada, Kanako Hisata, Makiko Tanaka, Manabu Fujie, Mayuki Fujiwara, Ryo Koyanagi, Tetsuro Ikuta, Asao Fujiyama, David J. Miller, Nori Satoh
Using the Acropora digitifera genome to understand coral responses to environmental change.
Nature, 476, 320-323 (2011)
pubmed / 日本語要約
 小椋
       
 
     2/1

1) Ciona intestinalis nuclear receptor 1: a member of steroid/thyroid hormone receptor family.
Carosa et al. PNAS 95, 11152-11157 (1998)
pubmed / 日本語要約

2) Presence of thyroid hormones in ascidian larvae and their involvement in metamorphosis.
Patricolo et al. J Exp Zool 290, 426-430 (2001)
pubmed / 日本語要約

 笹倉
       
       2/1 Mehrin Farooq, Jonathan Choi, Agustin I. Seoane, Roberto A. Lleras, Hoan V. Tran, Stephanie A. Mandal, Christine L. Nelson and Julio G. Soto
Identification of 3’UTR sequence elements and a teloplasm localization motif sufficient for the localization of Hro-twist mRNA to zygotic animal and vegetal poles.
Develop. Growth Differ. (2012) 54, 519–534
pubmed / 日本語要約
 飯塚
       
      1/18 Alexandre Paix , Lixy Yamada , Philippe Dru , Helene Lecordier , Gerard Pruliere , Janet Chenevert , Nori Satoh , Christian Sardet
Cortical anchorages and cell type segregations of maternal postplasmic/PEM RNAs in ascidians.
Developmental Biology 336 (2009) 96–111
pubmed / 日本語要約
 佐藤
       
      1/18 Renata Freitas, Carlos Gómez-Marín, Jonathan Mark Wilson, Fernando Casares and José Luis Gómez-Skarmeta
Hoxd13 Contribution to the Evolution of Vertebrate Appendages.
Dev. Cell 23, 1219-1229
pubmed / 日本語要約
 吉田
       
      1/11 Jean-Philippe Chambon, Akie Nakayama, Katsumi Takamura, Alex McDougall and Noriyuki Satoh
ERK- and JNK-signalling regulate gene networks that stimulate metamorphosis and apoptosis in tail tissues of ascidian tadpoles.
Development 134, 1203-1219 (2007)
pubmed / 日本語要約
 松延
   
 
   
 
       
 
1/11 
 
 
Frankel N, Erezyilmaz DF, McGregor AP, Wang S, Payre F, Stern DL.
Morphological evolution caused by many subtle-effect substitutions in regulatory DNA.
Nature. 2011 Jun 29;474(7353):598-603.
pubmed
 
   Nicholas
   

2012年

 
  日程 論文 担当者
   12/21
Christopher Hackley, Erin Mulholland, Gil Jung Kim, Erin Newman-Smith and William C. Smith
A transiently expressed connexin is essential for anterior neural plate development in Ciona intestinalis.
Development 140, 147-155 (2013)
 佐々木
       
   12/21 Tran V, Lim C, Xie J, Chen X.
Asymmetric division of Drosophila male germline stem cell shows asymmetric histone distribution.
Science (2012) 338, 679-682.
pubmed / 日本語要約
 三田
       
   11/9
William R. Jeffery
Siphon regeneration capacity is compromised during aging in the ascidian Ciona intestinalis.
Mechanisms of Ageing and Development 2012 Sep;133(9-10):629-636.
 藤野
       
   11/9
Aiko Sada, Atsushi Suzuki, Hitomi Suzuki, Yumiko Saga
The RNA-Binding Protein NANOS2 Is Required to Maintain Murine Spermatogonial Stem Cells.
11 SEPTEMBER 2009 VOL 325 SCIENCE
 保住
       
   10/19
 Zeller RW, Virata MJ, Cone AC.
Predictable mosaic transgene expression in ascidian embryos produced with a simple electroporation device.
Dev Dyn. 2006 Jul;235(7):1921-32.
 小椋
       
   10/19
Ochiai et al.,
Zinc-finger nuclease-mediated targeted insertion of reporter genes for quantitative imaging of gene expression in sea urchin embryos.
2012 PNAS 109, 10915-10920.
 笹倉
       
   10/12 Aoyama M, Kawada T, Satake H.
Localization and enzymatic activity profiles of the proteases responsible for tachykinin-directed oocyte growth in the protochordate, Ciona intestinalis.
Peptides. 2012 Mar;34(1):186-92. Epub 2011 Jul 30.
pubmed / 日本語要約
 飯塚
       
   10/12 Y. Liang , S. Zhang , Z. Wang
Alternative complement activity in the egg cytosol of amphioxus Branchiostoma belcheri: evidence for the defense role of maternal complement components.
PloS one January 2009 Volume 4 Issue 1 e4234
pubmed / 日本語要約
佐藤
       
   10/5 Kazuhiko Nishide, Michio Mugitani, Gaku Kumano and Hiroki Nishida
Neurula rotation determines left-right asymmetry in ascidian tadpole larvae.
Development 139, 1467-1475 (2012)
pubmed / 日本語要約
 吉田
       
   10/5 Daniel P. Denning, Victoria Hatch, H. Robert Horvitz
Programmed elimination of cells by caspase-independent cell extrusion in C. elegans
Nature vol488 2012/8/9
pubmed / 日本語要約
 佐々木
       
   9/7  Kaoru S. Imai, Yutaka Daido, Takehiro G. Kusakabe, and Yutaka Satou
Cis-Acting Transcriptional Repression Establishes a Sharp Boundary in Chordate Embryos
Science 24 August 2012: 964-967.
pubmed
Nicholas
       
   9/7  Katsuhisa Ozaki, Masasuke Ryuda, Ayumi Yamada, Ai Utoguchi, Hiroshi Ishimoto, Delphine Calas,rederic Marion-Poll, Teiichi Tanimura & Hiroshi Yoshikawa
A gustatory recepter involved in host plant recognition for oviposition of a swallowtail butterfly.
Nature 2 (2011) 542: 1-9
pubmed / 日本語要約
 松延
       
   7/20 Wagner E., Levine M.
FGF signaling establishes the anterior border of the Ciona neural tube.
Development. (2012) 139, 2351-9.
pubmed / 日本語要約
 三田
       
   7/20
Nityanandam A, Parthasarathy S, Tarabykin V.
Postnatal subventricular zone of the neocortex contributes GFAP+ cells to the rostral migratory stream under the control of Sip1
Dev Biol. 2012 Jun 15;366(2):341-56. Epub 2012 Apr 24.
pubmed / 日本語要約
 藤野
       
 
 7/6
Satou Y, Shin-I T, Kohara Y, Satoh N, Chiba S.
A genomic overview of short genetic variations in a basal chordate, Ciona intestinalis
BMC Genomics. 2012 May 30;13(1):208.
pubmed / 日本語要約
 保住
       
   7/6 Conzelmann M, Offenburger SL, Asadulina A, Keller T, Münch TA, Jékely G.
Neuropeptides regulate swimming depth of Platynereis larvae.
Proc Natl Acad Sci U S A. 2011 Nov 15;108(46):E1174-83.
pubmed / 日本語要約
 小椋
       
   6/22 Okada T, Yamamoto M.
Differentiation of the gonad rudiment into ovary and testis in the solitary ascidian, Ciona intestinalis.
Dev. Growth Differ (1999) 41, 759-768
pubmed / 日本語要約
 笹倉
       
   6/22
Pailomi Sanghavi, Sumin Lu, Graydon B. Gonzalvez
A functional link between localized Oskar, dynamic microtubules, and endocytosis
Developmental Biology 367(April 2012), 66-77
pubmed / 日本語要約
 飯塚
       
 
  6/8
Maki Shirae-Kurabayashi, Takahito Nishikata, Katsumi Takamura, Kimio J.
Tanaka, Chiaki Nakamoto and Akira Nakamura.
Dynamic redistribution of /vasa/ homolog and exclusion of somatic cell
determinants during germ cell specification in /Ciona intestinalis.
Development 133 (2006) 2683-2693.
pubmed / 日本語要約 
 
 松延
    6/8
Shinya Matsuda, Osamu Shimmi
Directional transport and active retention of Dpp/BMP create wing vein patterns in Drosophila
Developmental Biology 366, 153-16
 吉田
   
 
    5/18
 William R. Jeffery et al.
Trunk lateral cells are neural crest-like cells in the ascidian Ciona intestinalis: Insights into the ancestry and evolution of the neural crest
Developmental Biology 324 (2008) 152–160
 佐々木
       
    5/18
 Nadya Kondrashov, Aya Pusic, Craig R Stumpf, Kunihiko Shimizu, Andrew C     Hsieh, Shifeng Xue, Junko Ishijima, Toshihiko Shiroishi, and Maria Barna
Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning
Cell 145, 383–397, April 29, 2011

Nicholas

       
    5/11
 Enrico D'Aniello ,1, Maria Rosa Pezzotti, Annamaria Locascio, Margherita Branno
Onecut is a direct neural-specific transcriptional activator of Rx in Ciona intestinalis
Developmental Biology 355 (2011) 358–371
  藤野
       
    5/11
 Bazzini AA, Lee MT, Giraldez AJ.
Ribosome profiling shows that miR-430 reduces translation before causing
mRNA decay in zebrafish.
Science. 2012 Apr 13;336(6078):233-7.
  三田
       
    4/20  Chen JS, Pedro MS, Zeller RW.
   小椋
   
 miR-124 function during Ciona intestinalis neuronal development includes extensive interaction with the Notch signaling pathway.
Development. 2011 Nov;138(22):4943-53.
 
       
    4/20
 Cheryl L. Johnson and Andrew M. Spence
 Epigenetic Licensing of Germline Gene Expression by Maternal RNA in C. elegans
   保住
     SCIENCE VOL 333 2 SEPTEMBER 2011  
     
     4/13
 Euichi Hirose, Keisuke Nakashima and Atsuo Nishino
Is there intercellular cellulose in the appendicularian tail epidermis?
  飯塚
   
Communicative & Integrative Biology 4:6, 768-771, November/December 2011
 
 

 4/13

 Takuya Akiyama, Guillermo Marqués, Kristi A. Wharton
A Large bioactive BMP Ligand with distinct signaling properties Is produced by alternative proconvertase processing
Science Signaling 5, ra28
 笹倉
 

3/16

Eiraku M, Takata N, Ishibashi H, Kawada M, Sakakura E, Okuda S, Sekiguchi K, Adachi T, Sasai Y.
Self-organizing optic-cup morphogenesis in three-dimensional culture.
Nature. 2011 Apr 7;472(7341):51-6.
pubmed / 日本語要約

神谷

 

3/16

Saito T, Shiba K, Inaba K, Yamada L, Sawada H.
Self-incompatibility response induced by calcium increase in sperm of the ascidian Ciona intestinalis.
Proc Natl Acad Sci U S A. 2012 Feb 22.
pubmed / 日本語要約

三田

 

2/24

Dishaw LJ, Giacomelli S, Melillo D, Zucchetti I, Haire RN, Natale L, Russo NA, De Santis R, Litman GW, Pinto MR.
A role for variable region-containing chitin-binding proteins (VCBPs) in host gut-bacteria interactions.
Proc Natl Acad Sci U S A. 2011 Oct 4;108(40):16747-52. Epub 2011 Sep 19.
pubmed / 日本語要約

保住

 

2/17

Andreu-Agullo C, Maurin T, Thompson CB, Lai EC.
Ars2 maintains neural stem-cell identity through direct transcriptional activation of Sox2.
Nature. 2011 Dec 25;481(7380):195-8.
pubmed / 日本語要約

藤野

 

2/17

Rothbacher U, Bertrand V, Lamy C, Lemaire P.
A combinatorial code of maternal GATA, Ets and b-catenin-TCF transcription factors specifies and patterns the early ascidian ectoderm.
Development. 2007 Nov;134(22):4023-32.
pubmed / 日本語要約

河合

 

2/3

Raj A, Rifkin SA, Andersen E, van Oudenaarden A.
Variability in gene expression underlies incomplete penetrance.
Nature. 2010 Feb 18;463(7283):913-8.
pubmed / 日本語要約

小椋

 

2/3

Dahlberg C, Auger H, Dupont S, Sasakura Y, Thorndyke M, Joly JS.
Refining the Ciona intestinalis model of central nervous system regeneration.
PLOS One, 2, e4448
pubmed / 日本語要約

笹倉

 

1/13

Masaki Kamakura
Royalactin induces queen differentiation in honeybees.
Nature 473, 478-483. 26 May 2011
pubmed / 日本語要約

飯塚

       
       
   

2011年

 
日程 論文 担当者

12/9

Tsutsumi A, Kawamata T, Izumi N, Seitz H, Tomari Y.
Recognition of the pre-miRNA structure by Drosophila Dicer-1.
Nature Structural & Molecular Biology, 18, 1153-1158 (2011)
pubmed / 日本語要約

三田

12/9

Tetsuro Ikuta, Nori Satoh and Hidetoshi Saiga
Limited functions of Hox genes in the larval development of the ascidian Ciona intestinalis
Development 137, 1505-1513 (2010) doi:10.1242/dev.
pubmed / 日本語要約

佐々木

11/18

Youki Takezawa et al.β-catenin is a molecular switch that regulates transition of cell-cell adhesion to fusion.
SCIENTIFIC REPORTS | 1 : 68 |
pubmed / 日本語要約
保住

11/18

Jose-Edwards DS, Kerner P, Kugler JE, Deng W, Jiang D, Di Gregorio A.
The identification of transcription factors expressed in the notochord of Ciona intestinalis adds new potential players to the brachyury gene regulatory network.
Dev Dyn. 2011 Jul;240(7):1793-805.
pubmed / 日本語要約
藤野

11/4

Gallio et al.
The coding of temperature in the Drosophila brain.
Cell 144, 614-624 (2011)
pubmed / 日本語要約

笹倉

11/4

Cooley J, Whitaker S, Sweeney S, Fraser S, Davidson B.
Cytoskeletal polarity mediates localized induction of the heart progenitor lineage.
Nat. Cell Biol. 2011 Jul 24;13(8):952-7.
pubmed / 日本語要約

小椋

10/28

Kamiya D, Banno S, Sasai N, Ohgushi M, Inomata H, Watanabe K, Kawada M, Yakura R, Kiyonari H, Nakao K, Jakt LM, Nishikawa S, Sasai Y.
Intrinsic transition of embryonic stem-cell differentiation into neural progenitors.
Nature. 2011 Feb 24;470(7335):503-9.
pubmed / 日本語要約

神谷

10/28

Takeshi Noda
The maternal genes Ci-p53/p73-a and Ci-p53/p73-b regulate zygotic ZicL expression and notochord differentiation in Ciona intestinalis embryos.
Dev Boil. 2011 Sep 9
pubmed / 日本語要約

飯塚

10/14

Ussolino C., et al.
A Novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity.
Nucleic Acid Research, 2011 1-11
pubmed / 日本語要約

河合

10/14

McKitrick T.R. et al.
Allorecognition in a basal chordate consists of independent activating and inhibitory pathways.
Immunity 34, 616-626. (2011)
pubmed / 日本語要約

三田

10/7

Eva Coppola, Fabien d'Autreaux, Filippo M. Rijli and Jean-Francois Brunet
Ongoing roles of Phox2 homeodomain transcription factors during neuronal differentiation
Development 137, 4211-4220 (2010)
pubmed / 日本語要約

佐々木

10/7

Dong B, Deng W, Jiang D.
Distinct cytoskeleton populations and extensive crosstalk control Ciona notochord tubulogenesis.
Development 138, 1631-1641 (2011)
pubmed / 日本語要約

保住

9/16

Rothenaigner I, Krecsmarik M, Hayes JA, Bahn B, Lepier A, Fortin G, Gotz M, Jagasia R, Bally-Cuif L.
Clonal analysis by distinct viral vectors identifies bona fide neural stem cells in the adult zebrafish telencephalon and characterizes their division properties and fate.
Development. 2011 Apr;138(8):1459-69. Epub 2011 Mar 2
pubmed / 日本語要約

藤野

9/16

Shirae-Kurabayashi M, Matsuda K, Nakamura A.
Ci-Pem-1 localizes to nucleus and represses somatic gene transcription in the germline of Ciona intestinalis embryhos.
Development. 2011 Jul;138(14):2871-81..
pubmed / 日本語要約

河合

9/9

Mesquita D, Dekanty A, Milan M.
A dp53-dependent mechanism involved in coordinating tissue growth in Drosophila.
PLoS Biol. 2010 Dec 14;8(12):e1000566.
pubmed / 日本語要約

小椋

9/9

Fujikawa T, Takatori N, Kuwajima M, Kim GJ, Nishida H.
Tissue-specific regulation of the number of cell division rounds by inductive cell interaction and transcription factors during ascidian embryogenesis
Dev Biol. 2011 Jul 15;355(2):313-23.
pubmed / 日本語要約
笹倉

7/22

Yan H, Choi AJ, Lee BH, Ting AH.
Identification and Functional Analysis of Epigenetically Silenced Micro RNAs in Colorectal Cancer cell
PLoS One. 2011;6(6):e20628. Epub 2011 Jun 16.      
pubmed / 日本語要約

飯塚

7/22

Clare Hudson, Moly Ba, Christian Rouviere and Hitoyoshi Yasuo
Divergent mechanisms specify chordate motoneurons: evidence from ascidians
Development 2011
pubmed / 日本語要約

神谷

7/8

Dufour HD, Chettouh Z, Deyts C, de Rosa R, Goridis C, Joly JS, Brunet JF.
Precraniate origin of cranial motoneurons
Proc Natl Acad Sci U S A. 2006 Jun 6;103(23):8727-32. Epub 2006 May 30
pubmed / 日本語要約

佐々木

6/24

Takemoto T. et al.
Tbx6-dependent Sox2 regulation determines neural or mesodermal fate in axial stem cell.
Nature. 2011 470(7334): 394-8.
pubmed / 日本語要約

三田

6/24

Tarallo R, Sordino P
Time Course of Programmed Cell Death in Ciona intestinalis in Relation to Mitotic Activity and MAPK Signaling
Developmental Dynamics 230:251-262,2004
pubmed / 日本語要約

藤野

6/17

Yajima M, Wessel GM.
The DEAD-box RNA helicase Vasa functions in embryonic mitotic progression in the sea urchin.
Development. 2011 Jun;138(11):2217-22. Epub 2011 Apr 27.
pubmed / 日本語要約

保住

6/17

Hashimoto H, Enomoto A, Kumano G, Nishida H.
The transcription factor FoxB mediates temporal loss of cellular competence for notochord induction in ascidian embryos.
Development. 2011 Jun;138(12):2591-600.
pubmed / 日本語要約

小椋

6/3

Darras S, Gerhart J, Terasaki M, Kirschner M, Lowe CJ.
β-catenin specifies the endomesoderm and defines the posterior organizer of the hemichordate Saccoglossus kowalevskii.
Development. 2011 Mar;138(5):959-70.
pubmed / 日本語要約

河合

6/3

Nishino A, Baba SA, Okamura Y.
A mechanism for graded motor control encoded in the channel properties of the muscle ACh receptor.
Proc Natl Acad Sci U S A. 2011 Feb 8;108(6):2599-604
pubmed / 日本語要約

堀江

5/27

Ohata et al. 2011
Dual roles of Notch in regulation of apically restricted mitosis and apicobasal polarity of neuroepithelial cells.
Neuron 69, 215-230 (2011)
pubmed / 日本語要約

笹倉

5/27

Takefumi Negishi, Gaku Kumano and Hiroki Nishida
Polo-like kinase 1 is requred for localization of Posterior End Mark protein to the centrosome-attracting bosy and unequal cleavage in ascidian embryos
Development, Growth & Differentiation
pubmed / 日本語要約

飯塚

5/19

Takano K, Watanabe-Takano H, Suetsugu S, Kurita S, Tsujita K, Kimura S, Karatsu T, Takenawa T, Endo T.
Nebulin and N-WASP cooperate to cause IGF-1-induced sarcomeric actin filament formation.
Science. 2010 Dec 10;330(6010):1536-40.
pubmed / 日本語要約

新木

5/19

Harada, Y., Takagaki, Y., Sunagawa, M., Saito, T., Yamada, L., Taniguchi, H.,Shoguchi, E., Sawada, H.
Mechanism of self-sterility in a hermaphroditic chordate.
Science. 2008. 320(5875), 548-550.
pubmed / 日本語要約

三田

4/22

Kuranaga E, Matsunuma T, Kanuka H, Takemoto K, Koto A, Kimura K, Miura M.
Apoptosis controls the speed of looping morphogenesis in Drosophila male terminalia.
Development. 2011 Apr;138(8):1493-9. Epub 2011 Mar 9.
pubmed / 日本語要約

神谷

4/22

Dumollard R, Levasseur M, Hebras C, Huitorel P, Carroll M, Chambon JP, McDougall A.
Mos limits the number of meiotic divisions in urochordate eggs.
Development 138, 885-895 (2011)
pubmed / 日本語要約

保住

4/15

Chera S, Ghila L, Dobretz K, Wenger Y, Bauer C, Buzgariu W, Martinou JC, Galliot B.
Apoptotic cells provide an unexpected source of Wnt3 signaling to drive hydra head regeneration.
Developmental Cell 2009 Aug;17(2):279-289.
pubmed / 日本語要約

小椋

4/15

Yoshida K, Saiga H.
Repression of Rx gene on the left side of the sensory vesicle by Nodal signaling is crucial for right-sided formation of the ocellus photoreceptor in the development of Ciona intestinalis.
Developmental Biology 2011 Mar 21
pubmed / 日本語要約

吉田

3/25

Pangkong Moua, Donna Fullerton, Laura R. Serbus, Rahul Warrior and William M. Saxton
Kinesin-1 tail autoregulation and microtubule-binding regions function in salutatory transport but not ooplasmic streaming
Development. 2011 Mar;138(6):1087-92. Epub 2011 Feb 9
pubmed / 日本語要約

飯塚

3/25

France Denoeud et al.
2010 Science 330, 1381-1385
Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate.
pubmed / 日本語要約

笹倉

3/11

Rouget C, Papin C, Boureux A, Meunier AC, Franco B, Robine N, Lai EC, Pelisson A, Simonelig M.
Maternal mRNA deadenylation and decay by the piRNA pathway in the early Drosophila embryo.
Nature (2010) 467, 1128-1132
pubmed / 日本語要約

三田

3/11

Stolfi A, Levine M.
Neuronal subtype specification in the spinal cord of a protovertebrate.
Development. 2011 Mar;138(5):995-1004.
pubmed / 日本語要約

新木

2/25

Haga S, Hattori T, Sato T, Sato K, Matsuda S, Kobayakawa R, Sakano H, Yoshihara Y, Kikusui T, Touhara K.
The male mouse pheromone ESP1 enhances female sexual receptive behaviour through a specific vomeronasal receptor.
Nature. 2010 Jul 1;466(7302):118-22.
pubmed / 日本語要約

保住

2/25

Tresser J, Chiba S, Veeman M, El-Nachef D, Newman-Smith E, Horie T, Tsuda M, Smith WC.
doublesex/mab3 related-1 (dmrt1) is essential for development of anterior neural plate derivatives in Ciona.
Development. 2010 Jul;137(13):2197-203.
pubmed / 日本語要約

神谷

2/18

Choi HM, Chang JY, Trinh le A, Padilla JE, Fraser SE, Pierce NA.
Programmable in situ amplification for multiplexed imaging of mRNA expression.
Nature biotechnology 2010 Nov;28(11):1208-12
pubmed / 日本語要約

吉田

2/18

Kobayashi K, Nishida H.
Nuclear plasticity and timing mechanisms of the initiation of alkaline phosphatase expression in cytoplasm-transferred blastomeres of ascidians.
Dev Biol. 2001 Jun 15;234(2):510-20.
pubmed / 日本語要約

小椋

2/4

Nakamoto A, Nagy LM, Shimizu T.
Secondary embryonic axis formation by transplantation of D quadrant micromeres in an oligochaete annelid.
Development. 2011 Jan;138(2):283-90. Epub 2010 Dec 9.
pubmed / 日本語要約

河合

2/4

Yoriko Nakamura, Kazuhiro W. Makabe, and Hiroki Nishida
POPK-1/Sad-1 kinase is required for the proper translocation of maternal mRNAs and putative germ plasm at the posterior pole of the ascidian embryo
Development 132, (4731-4742) 2005
pubmed / 日本語要約

飯塚

1/28

Meng et al.
Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases
2008, Nature Biotechnology 26, 695-701
pubmed / 日本語要約

笹倉

1/28

Bollner T, Howalt S, Thorndyke MC, Beesley PW.
Regeneration and post-metamorphic development of the central nervous system in the protochordate Ciona intestinalis: a study with monoclonal antibodies.
Cell Tissue Res. 1995 Feb;279(2):421-32.
pubmed / 日本語要約

堀江

   

2010年

 
日程 論文 担当者

12/17

Arii J, Goto H, Suenaga T, Oyama M, Kozuka-Hata H, Imai T, Minowa A, Akashi H, Arase H, Kawaoka Y, Kawaguchi Y.
Non-muscle myosin IIA is a functional entry receptor for herpes simplex virus-1.
Nature. 2010 Oct 14;467(7317):859-62.
pubmed / 日本語要約

新木

12/17

Jiang D., Munro, E.M., Smith, W.C.
Ascidian prickle regulates both mediolateral and anterior-posterior cell polarity of notochord cells.
Current Biology, 2005, 15, 79-85.
pubmed / 日本語要約

三田

11/26

Rodriguez-Mari A, Canestro C, Bremiller RA, Nguyen-Johnson A, Asakawa K, Kawakami K, Postlethwait JH.
Sex reversal in zebrafish fancl mutants is caused by Tp53-mediated germ cell apoptosis.
PLoS Genet. 2010 Jul 22;6(7):e1001034
pubmed / 日本語要約

神谷

11/26

Toshifumi Minamoto, Shuji Hanai, Koji Kadota, Katsutaka Oishi, Hiromi Matsumae, Manabu Fujie, Kaoru Azumi, Noriyuki Satoh, Masanobu Satake and Norio Ishida
Circadian clock in Ciona intestinalis revealed by microarray analysis and oxygen consumption.
J Biochem. 2010 Feb;147(2):175-84
pubmed / 日本語要約

保住

11/18

Gregor T, Fujimoto K, Masaki N, Sawai S.
The onset of collective behavior in social amoebae.
Science. 2010 May 21;328(5981):1021-5
pubmed / 日本語要約

小椋

11/18

Khoueiry P, Rothbacher U, Ohtsuka Y, Daian F, Frangulian E, Roure A, Dubchak I, Lemaire P.
A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites.
Curr Biol. 2010 May 11;20(9):792-802
pubmed / 日本語要約

吉田

11/5

Kawauchi T, Sekine K, Shikanai M, Chihama K, Tomita K, Kubo K, Nakajima K, Nabeshima Y, Hoshino M.
Rab GTPases-dependent endocytic pathways regulate neuronal migration and maturation through N-cadherin trafficking.
Neuron. 2010 Aug 26;67(4):588-602
pubmed / 日本語要約

堀江

11/5
Jamie E. Kugler, Stefan Gazdoiu, Izumi Oda-Ishii, Yale J. Passamaneck, Albert J. Erives and Anna Di Gregorio.
Temporal regulation of the muscle gene cascade by Macho1 and Tbx6 transcription factors in Ciona intestinalis.
Journal of Cell Science, 2010, 123, 2453-2463
pubmed / 日本語要約

河合

10/22

Jedrusik MA, Schulze E.
A single histone H1 isoform (H1.1) is essential for chromatin silencing and germline development in Caenorhabditis elegans.
Development. 2001 Apr;128(7):1069-8
pubmed / 日本語要約

飯塚

10/22
Kenji Kobayashi, Kaichiro Sawada, Hiroki Yamamoto, Shuichi Wada, Hidetoshi Saiga and Hiroki Nishida
Maternal macho-1 is an intrinsic factor that makes cell response to the same FGF signal differ between mesenchyme and notochord induction in ascidian embryos
Development 130, 5179-5190 (2003)
pubmed / 日本語要約

笹倉

10/15

Tsuchimatsu T, Suwabe K, Shimizu-Inatsugi R, Isokawa S, Pavlidis P, Städler T, Suzuki G, Takayama S, Watanabe M, Shimizu KK.
Evolution of self-compatibility in Arabidopsis by a mutation in the male specificity gene.
Nature. 2010 Apr 29;464(7293):1342-6. Epub 2010 Apr 18
pubmed / 日本語要約

三田

10/15

Chambon JP, Soule J, Pomies P, Fort P, Sahuquet A, Alexandre D, Mangeat PH, Baghdiguian S.
Tail regression in Ciona intestinalis (Prochordate) involves a Caspase-dependent apoptosis event
associated with ERK activation.
Development. 2002 Jul;129(13):3105-14.
pubmed / 日本語要約

新木

10/8
Luco RF, Pan Q, Tominaga K, Blencowe BJ, Pereira-Smith OM, Misteli T.
Regulation of alternative splicing by histone modifications
Science. 2010 Feb 19;327(5968):996-1000. Epub 2010 Feb 4.
pubmed / 日本語要約

保住

10/8

Sakai T, Aoyama M, Kusakabe T, Tsuda M, Satake H.
Functional diversity of signaling pathways through G protein-coupled receptor heterodimerization with a species-specific orphan receptor subtype.
Mol Biol Evol. 2010 May;27(5):1097-106. Epub 2009 Dec 21.
pubmed / 日本語要約

神谷

10/1

Ludmila Francescatto, Sarah C. Rothschild, Alexandra L. Myers and Robert ,M. Tombes
The activation of membrane targeted CaMK-II in the zebrafish Kupffer's vesicle is required for left-right asymmetry
Development 137, 2753-2726 (August 15, 2010)
pubmed / 日本語要約

吉田

10/1

Sherrard K, Robin F, Lemaire P, Munro E.
Sequential activation of apical and basolateral contractility drives ascidian endoderm invagination.
Curr Biol. 2010 Sep 14;20(17):1499-510. Epub 2010 Aug 5.
pubmed / 日本語要約

小椋

9/16

Cabernard C, Prehoda KE, Doe CQ.
A spindle-independent cleavage furrow positioning pathway.
Nature. 2010 Sep 2;467(7311):91-4.
pubmed / 日本語要約

河合

9/16

Murata Y, Iwasaki H, Sasaki M, Inaba K, Okamura Y.
Phosphoinositide phosphatase activity coupled to an intrinsic voltage sensor.
Nature. 2005 Jun 30;435(7046):1239-43
pubmed / 日本語要約

堀江

9/9

Kokubu, C., Horie, K., Abe, K., Ikeda, R., Mizuno, S., Uno, Y., Ogiwara,S., Ohtsuka, M., Isotani, A., Okabe, M., Imai, K., Takeda, J.
A transposon-based chromosomal engineering method to survey a large cis-regulatory landscape in mice
Nature Genetics 41(8) 946-952 (2009)
pubmed / 日本語要約

笹倉

9/9

Prodon F, Chenevert J, Hebras C, Dumollard R, Faure E, Gonzalez-Garcia J, Nishida H, Sardet C, McDougall A.
Dual mechanism controls asymmetric spindle position in ascidian germ cell precursors.
Development. 2010 Jun;137(12):2011-21. Epub 2010 May 12.
pubmed / 日本語要約

飯塚

9/3

Ito T, Ando H, Suzuki T, Ogura T, Hotta K, Imamura Y, Yamaguchi Y, Handa H.
Identification of a primary target of thalidomide teratogenicity.
Science. 2010 Mar 12;327(5971):1345-50
pubmed / 日本語要約

新木

9/3

De Tomaso et al.
Isolation and characterization of a protochordate histocompatibility locus.
Nature. 2005, 438, 454-9.
pubmed / 日本語要約

三田

7/30
Claire Wyart, Filippo Del Bene, Erica Warp, Ethan K. Scott, Dirk Trauner, Herwig Baier & Ehud Y. Isacoff
Optogenetic dissection of a behavioural module in the vertebrate spinal
cord.
Nature 461, 407-410 (17 September 2009)
pubmed / 日本語要約

神谷

7/30
Manabu Yoshida, Michio Murata, Kazuo Inaba, and Masaaki Morisawa
A chemoattractant for ascidian spermatozoa is a sulfated steroid.
Proc Natl Acad Sci U S A. 2002 Nov 12;99(23):14831-6. Epub 2002 Oct 31
pubmed / 日本語要約
Yoshida M, Shiba K, Yoshida K, Tsuchikawa H, Ootou O, Oishi T, Murata M.
Ascidian sperm activating and attracting factor:
Importance of sulfate groups for the activities and implication of its putative receptor.
FEBS Lett. 2008 Oct 15;582(23-24):3429-33. Epub 2008 Sep 19
pubmed / 日本語要約

保住

     

7/16

Tsukiji S, Miyagawa M, Takaoka Y, Tamura T, Hamachi I.
Ligand-directed tosyl chemistry for protein labeling in vivo.
Nat Chem Biol. 2009 May;5(5):341-3.
pubmed / 日本語要約

小椋

7/16

Virata MJ, Zeller RW.
Ascidians: an invertebrate chordate model to study Alzheimer's disease pathogenesis.
Dis Model Mech. 2010 May-Jun;3(5-6):377-8.
pubmed / 日本語要約

吉田

7/2

Calarco JA, Superina S, O'Hanlon D, Gabut M, Raj B, Pan Q, Skalska U, Clarke L, Gelinas D, van der Kooy D, Zhen M, Ciruna B, Blencowe BJ.
Regulation of vertebrate nervous system alternative splicing and development by an SR-related protein.
Cell. 2009 Sep 4;138(5):898-910.
pubmed / 日本語要約

堀江

7/2

Yamada S, Hotta K, Yamamoto TS, Ueno N, Satoh N, Takahashi H.
Interaction of notochord-derived fibrinogen-like protein with Notch regulates the patterning of the central nervous system of Ciona intestinalis embryos.
Developmental Biology 328 (2009) 1-12.
pubmed / 日本語要約

河合

6/25

Lu WJ, Chapo J, Roig I, Abrams JM.
Meiotic Recombination Provokes Functional Activation of the p53 Regulatory Network"
Science, 4 June 2010, Vol. 328
pubmed / 日本語要約

飯塚

6/25

Ohtsuka Y., Obinata, T., Okamura Y.
Induction of ascidian peripheral neuron by vegetal blastomeres
Developmental Biology 2001 239, 107-117.
pubmed / 日本語要約

笹倉

6/18

Lutes AA, Neaves WB, Baumann DP, Wiegraebe W, Baumann P. .
Sister chromosome pairing maintains heterozygosity in parthenogenetic lizards.
Nature 464, 283-286.
pubmed / 日本語要約

三田

6/18

Kimura Y, Yoshida M, Morisawa M.
Interaction between noradrenaline or adrenaline and the beta 1-adrenergic receptor in the nervous system triggers early metamorphosis of larvae in the ascidian, Ciona savignyi.
Development. 2009 Jan;136(1):35-9. 
pubmed / 日本語要約

新木

6/11

Gibson DG, Glass JI, Lartigue C, Noskov VN, Chuang RY, Algire MA, Benders GA, Montague MG, Ma L, Moodie MM, Merryman C, Vashee S, Krishnakumar R, Assad-Garcia N, Andrews-Pfannkoch C, Denisova EA, Young L, Qi ZQ, Segall-Shapiro TH, Calvey CH, Parmar PP, Hutchison CA 3rd, Smith HO, Venter JC.
Creation of a Bacterial Cell Controlled by a Chemically Synthesized Genome.
Science. 2010 May 20.
pubmed / 日本語要約

保住

6/11

Chiba S, Jiang D, Satoh N, Smith WC.
Brachyury null mutant-induced defects in juvenile ascidian endodermal organs.
Development. 2009 Jan;136(1):35-9.
pubmed / 日本語要約

神谷

5/28

Munro EM, Odell G.
Morphogenetic pattern formation during ascidian notochord formation is regulative and highly robust.
Development. 2002 Jan;129(1):1-12.
pubmed / 日本語要約

小椋

5/28

Werner T, Koshikawa S, Williams TM, Carroll SB.
Generation of a novel wing colour pattern by the Wingless morphogen.
Nature. 2010 Apr 22;464(7292):1143-8. Epub 2010 Apr 7.
pubmed / 日本語要約

吉田

5/14

Nishino A, Okamura Y, Piscopo S, Brown ER.
A glycine receptor is involved in the organization of swimming movements in an invertebrate chordate.
BMC Neurosci. 2010 Jan 19;11:6.
pubmed / 日本語要約

堀江

5/14
Kuroda R, Endo B, Abe M, Shimizu M.
Chiral blastomere arrangement dictates zygotic left-right asymmetry pathway in snails.
Nature. 2009 Dec 10;462(7274):790-4.
pubmed / 日本語要約

河合