PDFs attached at bottom of page.
(Provided for academic use only; copyright retained by publisher.)

Hird SM. 2017. Evolutionary biology needs wild microbiomes. Frontiers in Microbiology, 8:725. [DOI:10.3389/fmicb.2017.00725] (OPEN ACCESS)

Ganz H, Doroud L, Firl A, Hird SM, Eisen JA, Boyce W. 2017. Community-level differences in the microbiome of healthy wild mallards and those infected by Influenza A viruses. mSystems, 2:e00188-16. [DOI: 10.1128/mSystems.00188-16] (OPEN ACCESS)

Hird SM, Sánchez C, Carstens BC, Brumfield RT. 2015. Comparative gut microbiota of 59 Neotropical bird species. Frontiers in Microbiology, 6:1403. [DOI:10.3389/fmicb.2015.01403] (OPEN ACCESS)

Martin LJ, Dunn RR, Adams R, Bateman A, Bik HM, Hawks J, Hird S, Hughes D, Kembel S, Kinney K, Kolokotronis S-O, Levy G, McClain C, Meadow JF, Medina R, Mhuireach G, Moreau C, Munshi-South J, Palmer C, Popova L, Schal C, Taubel M, Trautwein M, Ugalde J. 2015. Evolution of the indoor biome. Trends in Ecology and Evolution, 30(4): 223-232. [DOI: 10.1016/j.tree.2015.02.001]

Hird SM, Carstens BC, Cardiff SW, Dittmann DL, Brumfield RT. 2014. Sampling locality is more detectable than taxonomy or ecology in the brood-parasitic Brown-headed Cowbird (Molothrus ater). PeerJ, 2: 321. [DOI: 10.7717/peerj.321] (OPEN ACCESS)

Sullivan J, Demboski JR, Bell KC, Hird SM, Sarver B, Reid NM, Good JM. 2014. Divergence-with-gene-flow within the recent chipmunk radiation (Tamias). Heredity, 113: 185-194. [DOI: 10.1038/hdy.2014.27]

Reid NM, Hird SM, Brown JM, McVay JD, Pelletier TA, Satler JD, Carstens BC. 2013. Poor fit to the multispecies coalescent is widely detectable in empirical data. Systematic Biology, 63(3): 322-333.  [DOI:10.1093/sysbio/svt057]

McCormack JE, Hird SM, Zellmer AJ, Carstens BC and RT Brumfield. 2013. Applications of next-generation sequencing to phylogeography and phylogenetics. Molecular Phylogenetics and Evolution, 66(2): 526-538. [DOI:10.1016/j.ympev.2011.12.007]

Hird SM. 2012. lociNGS: a lightweight alternative for assessing suitability of next-generation loci for evolutionary analysis. PLoS ONE 7(10): e46847. [DOI: 10.137/journal.pone.0046847]  (OPEN ACCESS)

Zellmer AJ, Hanes MM, Hird SM and BC Carstens. 2012. Deep phylogeographic structure and environmental differentiation in the carnivorous plant Sarracenia alata. Systematic Biology, 61(5):763-777. [DOI:10.1093/sysbio/sys048] 

McCormack JE, Maley JM, Hird SM, Derryberry EP, Graves GR and RT Brumfield. 2012. Next-generation sequencing reveals phylogeographic structure and a species tree for recent bird divergences. Molecular Phylogenetics and Evolution, 62(1): 397-406. [DOI:10.1016/j.ympev.2011.10.012] 

Hird SM, Brumfield RT and BC Carstens. 2011. PRGmatic: an efficient pipeline for collating genome-enriched second generation sequencing data using a "provisional-reference genome". Molecular Ecology Resources, 11(4): 743-748. [DOI: 10.1111/j.1755-0998.2011.03005.x] 

Hird S, Kubatko L and B Carstens. 2010. Replicated subsampling enables accurate species tree estimation in empirical systems. Molecular Phylogenetics and Evolution, 57(2): 888-898. [DOI:10.1016/j.ympev.2010.08.006]

Hird S, Reid N, Demboski J and J Sullivan. 2010. Introgression at differentially aged contact zones in red-tailed chipmunks (Tamias ruficaudus). Genetica, 138(8): 869-883.[DOI: 10.1007/s10709-010-9470-z]

Reid N, Hird S, Schulte-Hostedde A and J Sullivan. 2010. Examination of nuclear markers at a zone of mitochondrial introgression in two chipmunk species (Tamias amoenus and Tamias ruficaudus). Journal of Mammalogy, 91(6)L 1389-1400. [DOI: 10.1644/09-MAMM-A-082.1]

<-- Koopman M, Fuselier D, Hird S and B Carstens. 2010. The carnivorous Pale Pitcher Plant harbors diverse, distinct and temporally dependent bacterial communities. Applied and Environmental Microbiology, 76: 1851-1860. [DOI: 10.1128/AEM.02440-09]

Hird S and J Sullivan. 2009. Assessing gene flow across a hybrid zone in red-tailed chipmunks (Tamias ruficaudus). Molecular Ecology, 18: 3097-3109. [DOI: 10.1111/j.1365-294X.2009.04196.x]

Good J, Hird S, Reid N, Demboski J, Steppan S, Martin-Nims T and J Sullivan. 2008. Ancient Hybridization and Mitochondrial Capture between Two Distantly Related Species of Chipmunks (Tamias: Rodentia). Molecular Ecology, 17 (5): 1313-1327. [DOI: 10.1111/j.1365-294X.2007.03640.x]


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Sarah Hird,
Aug 24, 2011, 7:46 AM
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Sarah Hird,
Aug 24, 2011, 7:46 AM
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Sarah Hird,
Aug 24, 2011, 7:46 AM
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Sarah Hird,
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Sarah Hird,
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Sarah Hird,
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Sarah Hird,
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Sarah Hird,
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Sarah Hird,
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Sarah Hird,
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Sarah Hird,
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Sarah Hird,
Aug 17, 2012, 8:19 AM
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