Peer Reviewed Abstracts & Posters

  1. Functional Networks of Human Diseases and Disease Genes
    Kontou P., Pavlopoulou A., Dimou N., Pavlopoulos GA, Bagos PG.
  2. 10th conference of the Hellenic Society for Computational Biology and Bioinformatics - HSCBB15
  3. Athens, Greece, October 09-11, 2015

  4. MSAPANALYZER: An online tool for assessing methylation sensitive amplified polymorphic (MSAP) markers by comparison to reference states
    Oulas A, Pavlopoulos GA, Vogiatzaki E, Zoumadakis C, Doulis A, iliopoulos I.
  5. 10th conference of the Hellenic Society for Computational Biology and Bioinformatics - HSCBB15
  6. Athens, Greece, October 09-11, 2015

  7. An online tool for assessing methylation sensitive amplified polymorphic (MSAP) markers by comparison to reference states
    Oulas A, Pavlopoulos GA, Vogiatzaki E, Zoumadakis C, Doulis A, iliopoulos I.
  8. SMODIA: “Statistical Methods for Omics Data  Integration and Analysis“, 

  9. Heraklion, Crete, Greece, November 10-12, 2014

  10. DrugQuest - A Text Mining workflow for drug association discovery
    Papanikolaou N, Pavlopoulos GA, Iliopoulos I.
  11. SMODIA: “Statistical Methods for Omics Data  Integration and Analysis“, 

  12. Heraklion, Crete, Greece, November 10-12, 2014

  13. powerClust: a web application for clustering analysis
    Pavlopoulos GA, Theodoropoulou M, Kontou P, Dimou N, Iliopoulos I, Bagos PG, Hamodrakas SJ.
    HSCBB14, 10-12 October 2014, AUA, Athens, Greece

  14. BioTextQuest+: A knowledge integration platform for literature mining and concept discovery
    Papanikolaou N, Pavlopoulos GA, Pafilis E, Theodosiou T, Schneider R, Satagopam V, Ouzounis C, Eliopoulos GA, Promponas V, Iliopoulos I
    ECCB14, 7-10 September 2014, Strasbourg, France [LINK]

  15. The role of Geminin in embryonic Neural Crest Cells a functional approach through bioinformatics analyses.
    Kanellakis NI, Patmanidi A, Nikolopoulou P, Stathopoulou A, Iliopoulos I, Pavlopoulos GALygerou Z, Stavros Taraviras S.
    HSCBB13, 22-24 November 2013, Lamia, Greece

  16. Shifting from literature mining to bioinformatics analysis with BioTextQuest.
    Papanikolaou N, Pavlopoulos GA, Satagopam V, Schneider R, Iliopoulos I.
    HSCBB13
    , 22-24 November 2013, Lamia, Greece

  17. OnTheFly 2.0: Automated Annotation of Scientific Documents.
    Pafilis E, Pavlopoulos GA, Satagopam V, Horn H, Arvanitidis C, Jensen L, Iliopoulos I, Schneider R.
    ISMB/ECCB 2013, 21-23July 2013, Berlin, Germany  [LINK]

  18. A Bioinformatics E-dating Story: Computational Prediction and Prioritization of Receptor-Ligand Pairs.
    Iaccuci E., Tranchevent L.-C., Popovic D., Georgios A. Pavlopoulos, De Moor B., Schneider R., Moreau Y
    Proc. of the International Conference on Intelligent Systems for Molecular Biology (ISMB SCS 2012), Long Beach, California, Jul. 2012. Published in special issue of BMC Bioinformatics. [LINK]

  19. Large scale computational analysis of biological networks: a comprehensive evaluation Award 
    Theodosia Charitou, Georgios A. Pavlopoulos and Pantelis G. Bagos
    7th Hellenic Society for Computational Biology and Bioinformatics Meeting - HSCBB12, 4 - 6 October 2012, Creta, Greece.

  20. A visualization approach to explore the Structural Variome with Meander
    Georgios A. Pavlopoulos, Alejandro Sifrim, Ryo Sakai, Yves Moreau, Jan Aerts
    7th Hellenic Society for Computational Biology and Bioinformatics Meeting - HSCBB12, 4 - 6 October 2012, Creta, Greece.

  21. Pipit: Visualizing Genomic Structural Variations
    Ryo Sakai, Matthieu Moisse, Joke Reumers, Alejandro Sifrim, Raf Winand, Georgios A. Pavlopoulos, Andrew Vande Moere, Jan Aerts
    Visualizing Biological Data Conference 2012 (VIZBI2012)
    , 6 - 8 March 2012, Heidelberg, Germany. [LINK]

  22. Meander: Using Hilbert curves to visually explore structural variations
    Georgios A. Pavlopoulos, Alejandro Sifrim, Ryo Sakai, Jan Aerts
    Visualizing Biological Data Conference 2012 (VIZBI2012)
    , 6 - 8 March 2012, Heidelberg, Germany. [LINK]

  23. Computational annotation and interpretation of single nucleotide variation to identify disease-causing variants by next-generation sequencing Award 
    Alejandro Sifrim, Zeynep Kalender, Jeroen Vanhoudt, Georgios A. Pavlopoulos, Stein Aerts, Joris R. Vermeesch, Yves Moreau, Jan Aerts.
    12th Annual Meeting, Belgian Society of Human Genetics (BeSHG)
    , 2 March 2011, Liege, Belgium [LINK]

  24. Using Hilbert curves to visualize structural variations with Meander  Award 
    Georgios A. Pavlopoulos, Alejandro Sifrim, Jan Aerts
    BeNeLux Bioinformatics Conference 2011 (BBC11)
    , 12 - 13 December 2011, Luxembourg. [LINK]

  25. Computational annotation and interpretation of single nucleotide variation to identify disease-causing variants by next-generation sequencing
    Alejandro Sifrim, Zeynep Kalender, Yuching Lai, Georgios A. Pavlopoulos, Stein Aerts, Joris R. Vermeesch, Yves Moreau, Jan Aerts.
    BeNeLux Bioinformatics Conference 2011 (BBC11)
    , 12 - 13 December 2011, Luxembourg. [LINK]

  26. Meander: Visualizing the structural Variome.
    Georgios A. Pavlopoulos, Alejandro Sifrim, Jan Aerts.
    HSCBB11 Conference,
    6 - 9 October 2011, Patras, Greece.

  27. OnTheFly 2.0: A Service to Automatically Annotate Files and Extract Biological Information.
    Evangelos Pafilis,
    Georgios A. Pavlopoulos, Venkata P. Satagopam, Heiko Horn, Christos Arvanitidis, Reinhard Schneider.
    HSCBB11 Conference,
    6 - 9 October 2011, Patras, Greece.

  28. A novel method for Meta-analysis of Gene Expression Data from Microarrays.
    Panagiota I. kontou, Georgios A. Pavlopoulos, Pantelis G. Bagos.
    HSCBB11 Conference,
    6 - 9 October 2011, Patras, Greece.

  29. Visualization techniques in Systems Biology
    Georgios A. Pavlopoulos, Maria Secrier, Reinhard Schneider, Jan Aerts.
    VizBi 2011 conference,
    15-20 March 2011, Broad Institute, Cambridge MA 7, MA 02142, Boston, USA. [LINK]

  30. Arena3D: Visualizing spatio-temporal information in heterogeneous biological networks.
    Secrier Maria, Georgios A. Pavlopoulos, Reinhard Schneider.
    EMBO Workshop,
    3 - 5 March 2010, Visualizing Biological Data (VizBi), EMBL, Heidelberg, Germany.

  31. Human Gene Correlation Analysis: A web-based tool for the coexpression of genes in humans.
    Ioannis Michalopoulos, Georgios A. Pavlopoulos, Alexandros Karelas, Myrto-Areti Kostadima, Reinhard Schneider and Sofia Kossida.
    Hellenic Bioinformatics & Medical Informatics Meeting 2009, Athens, Greece.

  32. Visualization and Data Integration Techniques in Systems Biology.
    Georgios A. Pavlopoulos, Charalampos N. Moschopoulos, Evangelos Pafilis, and Reinhard Schneider
    Hellenic Bioinformatics & Medical Informatics Meeting 2009, Athens, Greece.

  33. Human-gpDB:  A database of Human  GPCRs, G-Proteins, Effectors  and their interactions.
    Satagopam VP, Theodoropoulou MC, Stampolakis CK, Georgios A. Pavlopoulos, Papandreou NC, Bagos PG, Schneider R, Hamodrakas SJ.
    Hellenic Bioinformatics & Medical Informatics Meeting 2009, Athens, Greece.

  34. Arena3D: A visualization tool for network and clustering analysis.
    Georgios A. Pavlopoulos, Reinhard Schneider
    Hellenic Bioinformatics & Medical Informatics Meeting 2008, Thessaloniki, Greece.

  35. Martini: Finding Enhanced keywords and Classifying Documents by Comparing Genes Sets.
    Theodoros G. Soldatos, Sean I. O’Donoghue, Georgios A. Pavlopoulos, Venkata P. Satagopam, Reinhard Schneider
    Hellenic Bioinformatics & Medical Informatics Meeting
    2008, Thessaloniki, Greece.

  36. Reflect and OnTheFly: automated document annotation.
    Evangelos Pafilis, Georgios A. Pavlopoulos, Heiko Horn, Sean I. O.Donoghue, Lars J. Jensen, Michael Kuhn, Nigel P. Brown, Sean Hooper and Reinhard Schneider
    Hellenic Bioinformatics & Medical Informatics Meeting
    2008, Thessaloniki, Greece.

  37. GIBA: A new clustering approach for detecting protein complexes.
    Charalampos N. Moschopoulos, Georgios A. Pavlopoulos, Reinhard Schneider, Spiridon D. Likothanassis and Sophia Kossida.
    EMBnet Conference 2008: 20th Anniversary Celebration, 18-20
    September 2008 - Martina Franca, Puglia, Italy.

  38. A visualization tool for high level relationship and clustering analysis in large scale networks.
    Georgios A. Pavlopoulos, Reinhard Schneider,
    Hellenic Bioinformatics & Medical Informatics Meeting, 2007, Athens Greece.

  39. A visualization tool for high level relationship and clustering analysis in large scale networks.
    Georgios A. Pavlopoulos, Theodoros Soldatos, Evangelos Pafilis, and Reinhard Schneider.
    ISMB 2007, Vienna, Austria
    .

  40. Cross-discipline knowledge and data integration.
    Evangelos Pafilis,  Georgios A. Pavlopoulos, Sean O'Donoghue, Reinhard Schneider
    ISMB 2007, Vienna, Austria.

  41. Cross-discipline knowledge integration.
    Evangelos Pafilis,  Georgios A. Pavlopoulos, Reinhard Schneider
    ISMB 2006, Eilat, Israel.