• POPSTATS: a program to compute symmetry tests and other summary statistics on whole-genome data from humans and other organisms: https://github.com/pontussk/popstats (Skoglund et al. 2015, Nature)
  • PMDtools: a likelihood-based approach for separating ancient DNA from modern-day contamination. See the PMDtools page: http://code.google.com/p/pmdtools/ (Skoglund et al. 2014, PNAS)
  • Ry_compute: a method for inferring biological sex from ancient genomic sequences. Available here: [download] (Skoglund et al. 2014, JAS)