McMahan, C.D. & G.R. Zug. 2007. Burmese Hemidactylus (Reptilia, Squamata, Gekkonidae): Geographic variation in the morphology of Hemidactylus bowringii in Myanmar and Yunnan, China. Proc. Cal. Acad. Sci. 58(24): 485-509.

(2) Broach, J.S. & C.D. McMahan. 2009. New Records for Amphibians and Reptiles from Florence County, South Carolina. Herpetological Review 40(2): 243-244.

(3) Kenway-Lynch, C.S., McMahan, C.D., Geheber, A.D., Hayes, M., & K.R. Piller. 2010. Threatened fishes of the world: “Xenotocaeiseni Rutter, 1896 (Goodeidae). Environmental Biology of Fishes 87(3): 219-220.
(4) Geheber, A.D., McMahan, C.D., & K.R. Piller. 2010. First Record of the non-native Three Spot Gourami (Osphronemidae: Trichogaster trichopterus) in Jamaica. Aquatic Invasions 5(Supl.1): S13-S16.

(5) Rheubert, J.L., McMahan, C.D., Sever, D.M., Bundy, M.R., Siegel, D.S., & K.M. Gribbins. 2010. Ultrastructure of the reproductive system of the Black Swamp snake (Seminatrix pygaea). VII. Spermatozoon morphology and evolutionary trends of sperm characters in snakes. Journal of Zoological Systematics and Evolutionary Research 48(4): 366-375.

(6) McMahan, C.D., Geheber, A.D., & K.R. Piller. 2010. Molecular Systematics of the Enigmatic Middle American Genus Vieja (Teleostei: Cichlidae). Molecular Phylogenetics and Evolution 57: 1293-1300.
(7) Eckstut, M.E., McMahan, C.D., Crother, B.I., Ancheta, J.M., McLennan, D.A., & D.R. Brooks. 2011. PACT in Practice: Comparative historical biogeographic patterns and species-area relationships of the Greater Antillean and Hawaiian Island terrestrial biotas. Global Ecology and Biogeography 20: 545-557.
(8) McMahan, C.D., Murray, C.M., Geheber, A.D., Boeckman, C.D. & K.R. Piller. 2011. Paraneetroplus synspilus is a junior synonym of Paraneetroplus melanurus (Teleostei: Cichlidae). Zootaxa 2833: 1-14.

(9) McMahan, C.D., Matamoros, W.A., Álvarez Calderón, F.S., Henríquez, W.H., Recinos, H.M., Chakrabarty, P., Barraza, E., & N. Herrera. 2013. Checklist of the inland fishes of El Salvador. Zootaxa 3608(6): 440-456.

(10) McMahan, C.D., Davis, M.P., Domínguez-Domínguez, O., García de Leon, F.J., Doadrio, I., & K.R. Piller. 2013. From the mountains to the sea: phylogeography and cryptic diversity within the mountain mullet, Agonostomus monticola (Teleostei: Mugilidae). Journal of Biogeography 40(5): 894-904.

(11) Matamoros, W.A., Chakrabarty, P., Angulo, A., Garita-Alvarado, C., & C.D. McMahan. 2013. A new species of Roeboides (Teleostei: Characidae) from Costa Rica and Panama, with a key to Middle American species of the genus. Neotropical Ichthyology 11(2): 285-290.

(12) Carstens, B.C., Brennan, R.S., Chua, V., Duffie, C.V., Harvey, M.G., Koch, R.A., McMahan, C.D., Nelson, B.J., Newman, C.E., Satler, J.D., Seeholzer, G., Posbic, K., Tank, D.C., & Sullivan, J. 2013. Model selection as a tool for phylogeographic inference: an example from the willow Salix melanopsis. Molecular Ecology  22(15): 4014-4028.

(13) McMahan, C.D., Smith, W.L., Sparks, J.S., Chakrabarty, P., & M.P. Davis. 2013. Temporal patterns of diversification across global cichlid biodiversity (Acanthomorpha: Cichlidae). PLoS ONE 8(8): e71162.

(14) Bohn, S., Barraza, E., McMahan, C.D., Matamoros, W.A., & Kreiser, K. 2013. Cross amplification of microsatellite loci developed for alligator gar (Atractosteus spatula) in tropical gar (Atractosteus tropicus). Revista Mexicana de Biodiversidad 84: 1349-1351.

(15) Murray, C.M., McMahan, C.D., Dobie, J.L., & C. Guyer. 2014. Cranial variation amongst independent lineages of the alligator snapping turtle (Macrochelys temminckii). Journal of Zoological Systematics and Evolutionary Research.

(16) Matamoros, W.A., McMahan, C.D., Chakrabarty, P., Albert, J.S., & J.S. Schaefer. 2015. Derivation of the freshwater fish fauna of Central America revisited:  Myers's hypothesis in the twenty-first century. Cladistics 31(2): 177-188.

(17) McMahan, C.D., Matamoros, W.A., Barraza, E., Kutz, J., & P. Chakrabarty. 2015. Taxonomic status of the Lago Coatepeque endemic convict cichlid Amatitlania coatepequeCopeia 4: 633-638.

(18) McMahan, C.D., Matamoros, W.A., Piller, K.R., & P. Chakrabarty. 2015. Taxonomy and systematics of the herichthyins (Cichlidae: Tribe Heroini), with the description of eight new Middle American genera. Zootaxa 3999(2): 211-234.

(19) McMahan, C.D., Freeborn, L.R., Wheeler, W.C., & B.I. Crother. In Press. Forked tongues revisited: molecular apomorphies support morphological hypotheses of squamate evolution. Copeia.

Book Reviews & Other Publications:
McMahan, C.D. 2011. A Review of: A Field Guide to Coastal Fishes from Maine to TexasCopeia 2011(3).

Mohammadi, S. & C.D. McMahan. 2013. A Review of: Venomous Reptiles of the United States, Canada, and Northern Mexico Vol. 2: Crotalus. Copeia 2013(1).

Non Peer-Reviewed Publications
McMahan, C.D. 2012. Museum Techniques: Preservation of Snake Specimens for Scientific Study. EoL Snake Species of the World - Life Desk.

Edwards, M.L. & C.D. McMahan. 2011. Stuffed Birds and Pickled Frogs: The importance of Natural History Museums in South Carolina. South Carolina Wildlife Oct-Nov issue.