Mariana Neves

Currently, I am a researcher at the ZEBET in the Bundesinstitut für Risikobewertung (BfR) (Berlin, Germany). I obtained my doctoral degree in Computer Science at the Universidad Complutense de Madrid (Madrid, Spain) and my Master Science degree in Computer Science at Universidade Federal de Pernambuco (Recife, Brazil). I graduated in Civil Engineering also at the Universidade Federal de Pernambuco.

Professional activities:

  • Organizer of:
  • Guest editor for the "Semantic Mining of Languages in Biology and Medicine" special issue in the Journal of Biomedical Semantics (JBMS) (to appear)
  • Reviewer for Bionformatics, Nucleic Acids Research, Briefings in Bioinformatics, BMC Bioinformatics, Database, Journal of Biomedical Informatics, JAMIA, Semantic Web journal, BMC Research Notes, Frontiers in Immunology, Semantic Web Journal.
  • Member of Association for Computing Machinery, Association for Computational Linguistics, International Society of Biocuration and Gesellschaft für Informatik.
  • Member of the Program committee:
    • International Conference on Computational Linguistics (COLING) 2018
    • Annual Meeting of the Association for Computational Linguistics (ACL) 2017
    • European Chapter of the Association for Computational Linguistics (EACL) 2017
    • Biomedical Natural Language (BioNLP) Workshop 2017, 2018
    • International Workshop on Health Text Mining and Information Analysis (Louhi) 2018, 2017, 2016, 2015
    • BioASQ Workshop 2018, 2017, 2016, 2015
    • MultilingualBIO Workshop 2018
    • Ontologies and Data in Life Sciences Workshop (ODLS) 2017
    • International Symposium on Semantic Mining in Biomedicine (SMBM) 2016, 2014

Brief biography:

Teaching:

Projects and seminars:
Courses:

Resources

Corpora and Datasets
  • Biomedical Translation Corpora
  • BioMedLAT corpus
    If you use it, please cite:
    Neves M, Kraus M BioMedLAT Corpus: Annotation of the Lexical Answer Type for Biomedical Questions, Open Knowledge Base and Question Answering Workshop, Coling, 2016, Osaka, Japan. [pdf]
  • Scielo parallel corpus of biomedical publications (English/French, English/Spanish, Englis/Portuguese)
    If you use it, please cite:
    Neves M, Jimeno-Yepes A and Névéol A. The Scielo Corpus: a Parallel Corpus of Scientific Publications for Biomedicine, International Conference on Language Resources and Evaluation (LREC), 2016, Portoroz, Slovenia. [pdf and bibtex]
  • Parallel dataset of biomedical questions (English/German, English/Spanish)
    If you use it, please cite:
    Neves M, Herbst K, Uflacker M, Plattner H. Preliminary evaluation of passage retrieval in biomedical multilingual question answering, BioTxtM 2014, Fourth Workshop on Building and Evaluating Resources for Health and Biomedical Text Processing, 2014, Reykjavik, Iceland. [pdf] [workshop]
  • CellFinder corpus for cell types, cell lines, genes/proteins and species
    If you use it, please cite:
    Neves M, Damaschun A, Kurtz A, Leser U. Annotating and evaluating text for stem cell research, Third Workshop on Building and Evaluating Resources for Biomedical Text Mining, Language Resources and Evaluation (LREC), 2012, Istanbul, Turkey. [pdf] [workshop] [BibTex]
Tools
Other resources
Untergeordnete Seiten (2): Publications Teaching
ċ
bib12.bib
(2k)
Mariana Neves,
14.11.2013, 12:43
Ċ
Mariana Neves,
14.11.2013, 12:43
ċ
biocreative13bioc.bib
(1k)
Mariana Neves,
14.11.2013, 13:17
Ċ
Mariana Neves,
14.11.2013, 12:43
ċ
biocreative13iat.bib
(1k)
Mariana Neves,
14.11.2013, 12:43
Ċ
Mariana Neves,
14.11.2013, 12:44
Ċ
Mariana Neves,
14.11.2013, 12:44
ċ
bmc10.bib
(1k)
Mariana Neves,
14.11.2013, 12:44
ċ
bmc11ucompare.bib
(2k)
Mariana Neves,
14.11.2013, 12:44
Ċ
Mariana Neves,
14.11.2013, 12:44
ċ
database13.bib
(2k)
Mariana Neves,
14.11.2013, 12:44
ċ
ddi11.bib
(0k)
Mariana Neves,
14.11.2013, 12:44
Ċ
enia01.pdf
(222k)
Mariana Neves,
14.11.2013, 12:44
ċ
gb08.bib
(2k)
Mariana Neves,
14.11.2013, 12:44
Ċ
Mariana Neves,
14.11.2013, 12:45
Ċ
Mariana Neves,
14.11.2013, 12:45
ċ
jbs11calbc.bib
(3k)
Mariana Neves,
14.11.2013, 13:10
Ċ
Mariana Neves,
14.11.2013, 12:45
ċ
lncs10.bib
(1k)
Mariana Neves,
14.11.2013, 12:45
ċ
lrec12.bib
(0k)
Mariana Neves,
14.11.2013, 12:45
Ċ
lrec12.pdf
(179k)
Mariana Neves,
14.11.2013, 13:21
Ċ
Mariana Neves,
03.04.2014, 11:57
Ċ
Mariana Neves,
03.04.2014, 11:56
ċ
nar07.bib
(2k)
Mariana Neves,
14.11.2013, 13:16
ċ
nar13cellfinder.bib
(2k)
Mariana Neves,
04.12.2013, 00:27
Ċ
Mariana Neves,
14.11.2013, 13:29
ċ
semeval13ddi.bib
(1k)
Mariana Neves,
14.11.2013, 12:47
Ċ
Mariana Neves,
14.11.2013, 12:47
Ċ
smc01.pdf
(251k)
Mariana Neves,
14.11.2013, 12:47
Comments