Medical Apps

Health Informatics World Wide

ResearchGate

Mittwoch, 25.01.2012

09:00 - 12:00 Uhr

  DATENBANK   ZUGANG
 
  • MOLEKULARBIOLOGISCHE DATENBANKEN  
 

ÜBERSICHTSSEITEN  

 

09:00  

EBI
NCBI
meddb   INFO 

http://www.ebi.ac.uk/services/
http://www.ncbi.nlm.nih.gov/Sitemap/index.html
http://www.meddb.info/  

09:15 

EDUCATIONAL RESOURCES 

 

09:30 

EBI: 2can

NCBI:

 NCBI Alphabetical Quicklinks

 Twelfe NCBI Mini-Courses  

University of Manchester


Bioinformatics.org

http://www.ebi.ac.uk/2can/


http://www.ncbi.nlm.nih.gov/Education/ 


http://www.cs.manchester.ac.uk/

Kursehttp://www.manchester.ac.uk/postgraduate/researchdegrees/researchdegrees/atoz/

http://www.bioinformatics.org/

 

LITERATURDATENBANKEN 

 

09:40 

OMIM

http://www.ncbi.nlm.nih.gov/sites/entrez?db=omim

 

SEQUENZDATENBANKEN 

 

09:45 

GENBANK
  Beispiel
EMBL
ENTREZ NUCLEOTIDE
UNIGENE
UNIPROT

http://www.ncbi.nlm.nih.gov/Genbank/

http://srs.ebi.ac.uk/srs6bin/cgi-bin/wgetz?-page+LibInfo+-lib+EMBLRELEASE
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Nucleotide
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=unigene.
http://www.uniprot.org/.

 

GENOMISCHE DATENBANKEN

 

10:00 

ENSEMBLE

http://www.ensembl.org/

 

STRUKTURDATENBANKEN 

→ Biochemie - Datenformate

 

10:15 

PDB
 raswin  
 HelpFile.
 Beispiele......   
PDBsum

http://www.rcsb.org/pdb/  


Medikament in DrugBank aufrufen und pdf-Datei herunterladen.
http://www.ebi.ac.uk/pdbsum/

  PATHWAY - DATENBANKEN 
--> INFO
 EXKURS: SYSTEMBIOLOGIE

10:30 

BIOCARTA  
KEGG
PATHWAY INTERACTION DB
GO - GENE ONTOLOGY
PROTEINLOUNGE
 Pathways mit Hilfe des Pathway Builder erstellen

http://www.biocarta.com/ 
http://www.genome.jp/kegg/ ..
http://pid.nci.nih.gov/
http://www.geneontology.org/ 
http://www.proteinlounge.com/Pathway/ 
http://www.proteinlounge.com/PathwayBuilder.aspx

  ONKOLOGISCHE DATENBANKEN  
--> INFO

10:45 

PDQ → INFO
NCCN  → INFO
ATLAS OF GENETICS  → INFO
CANCER CHROMOSOMES
ONCOMINE  
THE CANCER GENOME ATLAS  → INFO
THE CANCER GENOME PROJECTS  → INFO

http://www.cancer.gov/cancertopics/pdq/adulttreatment 
http://www.nccn.org/ 
http://atlasgeneticsoncology.org  
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?CMD=Home&DB=cancerchromosomes
http://www.oncomine.org  
http://cancergenome.nih.gov/
http://www.icgc.org/

 
  • TOOLS 

11:00 

BLAST  INFO
            → INFO

FASTA → INFO  

http://www.ncbi.nlm.nih.gov/BLAST/
http://www.ebi.ac.uk/blast/
http://www.ebi.ac.uk/fasta33/ 

 
  • METASUCHE  

11:10 

EBI: eb-eye-search
NCBI  

http://www.ebi.ac.uk
http://www.ncbi.nlm.nih.gov/gquery/gquery.fcgi 

 
  • SPEZIALDATENBANKEN 

EXKURSE:

11:15 

micro-RNA - Datenbanken

http://www.meddb.info/index.php?search=microrna

 

Epigenetik - Datenbanken 

http://www.meddb.info/index.php?cat=8&subcat=258 

11:30 

  • ABSCHLUSSPRÜFUNG