My Dedication to the Bioinformatics Community

Love in speech is truth. Love in action is righteousness. Love in thought is peace. Love in understanding is non-violence.

--- Sathya Sai Baba---


Bookmarks

BioLinks
DictionaryBarn.com

Educational services

Java Scrap Book - your own techno- tutorial hub
Big Data Interview Questions
NCBI bioinformatics mini-courses
2canBioinformatics -bioinformatics educational
3-D Modeling of Proteins
37-523 Computational Biology 2002-03
3rd Regional Training Courses in Bioinformatics Ap
A database of 3D enzyme active site templates
A Glossary for Systems Biology
A List of Gene Finding programs
A mini HTML lesson for beginners
A Series of Structural Method Tutorials
A Short Java Course
Advanced Bioinformatics Workshop - Course Page
Advanced Topics Course on Computational Systems Bi
Algorithms in Computational Biology lectures
Alphabetical Directory of Linux Commands
Amos' WWW links page
Animal Bioinformatics and Computational Genomics
Autoimmune Diseases Online
Available Databanks at the Institut Pasteur
babel
BayGenomics Useful web resources
BE561 DNA & Protein Sequence Analysis
Beginner's Guide to Python
Beijing Workshop on ``MONTE CARLO METHODS IN SCIEN
Best Free Perl and CGI Programming Training Materi
Bhabha Atomic Research Centre : List of Vacancies
BI 418 Home Page
BIMM 140 - Introduction to Bioinformatics
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Biochemical Basis of Biology
Biochemistry 03-232 Home Page lectures
Biochemistry 118Genomics, Bioinformatics & Medicin
Bioinformatic Sequence Markup Language (BSML™)
BIOINFORMATICS & GENOMICS COMPANIES:
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BIOINFORMATICS and COMPUTATIONAL GENOMICS COURSES
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Bioinformatics is quickly becoming a firm part of
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BioTech's life science dictionary!
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BLAST Servers Around the World
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BRONCO - Bioinformatics Resource for Oncology
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Category bioinformatik.de / Software /
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CENTER FOR MOLECULAR MODELING (CMM)
Chapters 1, 2 & 4 of Learning Perl
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CHEMFINDER.COM
ClustalW FTP download page
Codon Usage Database
COMP 572 - References
Companies
Computational Biology
Computational Biology and bioinformatics Environme
Computational gene finding WWW prediction services
Computational Mathematics E-Bibliography
Computational Molecular Biology lecture videos
Computational Molecular Biology: An Introduction
Computer Aided Chem Molecular Modeling Tutorial
Computer aided Identification of Antigenic Region
Computer Graphics 2003 / Semester 2
Computer Skills For Biologists
Consulting and Computational Resources for
Contemporary Programming
COURSE TOPICS
courses+and+tutorial
CRISP Thesaurus
DaniWeb TechTalk computer support - Code Snippets
Darwin and Problems from Bioinformatics
DARWIN HOME
Databases and Tools for 3-D Protein Structure Comp
Databases at the Weizmann Institute of Science
DATABASES IN INDIA FOR GENOMIC RESEARCH
Databases of interest for small molecule docking
Dictionaries Microsoft Reader Home Downloads
discover motifs (highly conserved regions) in grou
DNA from the Beginning
DNA Motif and Structure Tools
DNAstuff : } ~ what stuff life is made of
DOE Joint Genome Institute
DoeGenomes.org--genome programs of the U.S. Depart
DOLOP - A Database of Bacterial Lipoproteins
Download complete xmlspy® 2004 Enterprise Edition
Downloads for books formerly published by Wrox and
Drag & Drop and Other Quizzes
Drug Databases
Drug Discovery Glossary
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Elements of Bioinformatics
EMBOSS GUI
EMBOSS on the Windows platform
EMBOSS User Documentation
eMOTIF-SEARCH (Protein Classification)
Essential Immunology
Exam Paper On Line Search By Subject.
Exclusive Monthly of Life Science & Technology
ExPASy Proteomics tools
File Conversions
Final Projects Submitted for Credit in Computation
Fractal Genomics - Home
Free Books
FREE J2EE BOOKS
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Front Line Strategic Market Reports (tm) by Naviga
FTP server Molecular Design Lab DDD
Functional Genomics Combinatorial library synthesi
Gene Identification Software sites
General Biology
General, Organic and Biochemistry
Genetic Recombination in Bacteria
genetics database mirrors to speed up the access o
GeneTraffic™ Training Movies and Documentation
Genome Canada Home Page
Genome Informatics
Genome Wide FASTA Search Bioinformatics Centre IMT
GenomeWeb-Protein 3D Structure Analysis
Genomic Glossary homepage
Genomic Knowledge based Software gallery
Genomic Perl: From Bioinformatics Basics to Worki
Get Your Web Browser Up to Genomics Speed
GNN - Quick Guide to Sequenced Genomes
Grade 12 Biology
GRASP-DNA
Hetero-compound Information Centre - Uppsala - Rel
HGMP-RC Bioinformatics
Hierarchical Clustering: Tutorial
Hierarchy For All Packages-JAVA 1.4.2
Home Page of Public Domain Resources in Biology (P
Homology Modeling: Protocols and Concepts
http://distro.ibiblio.org/pub/Linux/distributions/
http://www.atgc.org/Bioinformatics_on_the_web.html
http://www.freewebmasterhelp.com/tutorials/phpmysq
http://www.planet-source-code.com
http://www2.auckland.ac.nz/lbr/bio/ebooks.htm
Human Genome Project Education Resources
Human Genome Project Information Genomes to Life
IBM India Research Lab
IEEE Xplore: Biomedical Engineering, IEEE Transact
IMB Jena Global Library - Biology: Tutorial, Books
immunology Tutorials
In silico experiments with complete bacterial geno
in-silico Biology Successfully
Index of /ismb2004/tutorials
Index of /jbpc/GenomesMedia
Index of /manuals
Index of all fields and methods-Java
India Network Foundation
Indian Council of Medical Research
Information and Resources for Biology 600, Fall 20
Information sites mirrored nightly at CCGB
Installation and start up instructions
Institute for Pure and Applied Mathematics
International Comparative Study on Applying Molecu
INTERNET GLOSSARY of TERMS Updated October 2003
Introduction to Bioinformatics tutorial 4
Introduction to Bioinformatics tutorial 7
Introduction to Bioinformatics: Fall 2001 Lecture
Introduction to Bioinformatics: Fall 2003 Lecture
Introduction to cochlear implants
Introduction to Computational Biology
Introduction to KEGG
Introduction to Servlets, JSP, and Servlet Engines
Introduction to Systems Biology
ITtoolbox for Java(TM) Technologies Knowledge Base
J2EE BOOKS
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Java Programming FAQs and Tutorials: Learning Java
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JBuilder Downloads Homepage
Jim's Perl Quiz
Journal of Computer-Aided Molecular Design
Just Enough Molecular Biology for Computer Scienti
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Landmark Papers from Science and Nature
Learning About UNIX-GNU/Linux
Lecture and Tutorial Materials from the Research D
Lecture Notes
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Lectures
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LECTURES 2003 LECTURES 2004
Lectures and Tutorials
Library of 3-D Molecular Structures
Ligand.Info: Small-Molecule Meta-Database
LigBase Home page at the Sali Lab
Link Site Motif Search
Linux Guides and Tutorials in English
linux tutorials ::How-to.tk- - linux tutorials
List of Methods Pages for Genomics
Locating Binding Sites in Protein Structures
Manual Protein Superimposition
MarvinSketch & MarvinView
Microarray
MicroArray Genome Imaging & Clustering Tool
MICROBIAL GENETICS AND MICROBIAL METABOLISM
Microsoft Reader Catalog of eBook
Miscellaneous Web Sites
Model Organism Databases
MODELLER Download & Installation
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MolBiol.Net - Molecular Biology & Bioinformatics
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Molecular Biology, Useful Resources
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Molecular Models for Biochemistry at CMU
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motif alignment and search tool
Motif/Pattern/Profile searches
Movie tutorials:
Movies You Can View Directly with Your Browser
MPEG Movies of Protein Motions
my blogger page
My favorite microarrays & analysis reference books
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National Bioinformatics Network Introduction to Bi
NeoBio Bioinformatics Algorithms in Java
Netscape Devedge
NetSci's Science Center: Bioinformatics
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Official Java Programming Documentation
On line analysis tools
ONLINE ANALYSIS TOOLS
ONLINE BIOINFORMATICS
Online Books
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Open Directory - Science: Biology: Bioinformatics
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Open Motif -- OpenMotif -- Portal
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Overview of the free JXTA book by Brendon J. Wilso
P.G. Diploma in Intellectual Property Rights Law
PDB Format Description Version 2.2
PDB Sources for RasMol/UMass Amherst
Penn StateUniv
Perl/Tk is up to you !
Pharmabase
PHP Manual
PHYLIP on the Web
Phytochemical & Ethnobotanical Search Page
PK Structure - 3D Tools
Plant Ontology™ Consortium
Polish Bioinformatics Site
PRACTICAL BIOINFORMATICS - BIOL 497D Handouts
Princeton Molecular Biology Summer Workshop Lab Ma
Principles of Protein Structure Using the Internet
Principles of Protein Structure Using the Internet
Programmer to Programmer resource center
Programs for biosequence analysis
Prokaryotic database of gene regulation and regula
Protein Ligand Databases
Protein Mechanics - Science - Live Structure Movie
protein structure analysis and prediction
Protein Structure Prediction
protocol-online
Quick Links
Quick Links http://www.bioinf.ceh.ac.uk/RSEIO/
Readings and Lecture Notes
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redhat.com
Relibase - Easy Searching of Protein-Ligand Comple
Representations and Algorithms for Computational M
Research Publications Raghava, G.P.S
Resources Biotechnology Tutorials Online
Resources for Java server-side developers
Reusable Software in Phylogeny, Bioinformatics and
School of Science and Mathematics
Science Careers jobsearch
Sequence Analysis
sequence morif search
Sequencing Projects Blast Search Services @ SANGER
Small Molecule SIG
Software
SOFTWARE AVAILABLE AT CDFD
Software in Catagory GDRM
South African National Bioinformatics Institute
Specialising in Open Source computer language trai
stanford Index of /class/cs262/Spring2003/Slides
Statistical analysis of microarray data
Structual Proteomics or Protein Structure Predicti
structural analysis
STRUCTURE ALIGNMENT TOOLS
Structure based drug design and molecular modeling
STRUCTURE EVALUATION
Subject: Biomedical Science
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Swiss-PdbViewer: Superimposition
systems biology, bioinformatics, data engineering
Teach-Informatics HomePage BIOINFORMATICS PROBLEMS
technical notes on biocomputing
Technopark, Kerala, India
The BioJava Tutorial
The BioToolKit
The comprehensive Universal Protein Resource down
The data analysis lab
The Genetics Education Guide
The Molecular Biology Database Collection: 2004 u
The Molecular Modelling Toolkit
the Stanford MicroArray Database, stores raw
The Studio Genetics and Evolution Course
The Sun Center of Excellence for Visual Genomics
The University of Michigan Bioinformatics Program
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Tutorial for Bioinformatics
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Universal Molecular Modeling Software List
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Useful Tools/Links
Various Structural Biology Tutorials
VigyaanCD.org Vigyaan is an electronic workbench
VISTA is a comprehensive suite of programs and dat
visualbuilder.com home
Web Servers at Institute of Microbial Technology,
Web Tutorials and Tools Homology Modeling
WebElementsTM periodic table Scholar edition
WebLogic Server Trial Download
Welcome to BioTech
Welcome to DBT's Website
Welcome to HireHealth.com
Welcome to NetSci's
Welcome to Softberry
Welcome to Sumanas, Inc.
Welcome to the Applied Genomics Technology Center
Welcome to the BCM Search Launcher
Welcome to the BioComputing Hypertext Coursebook
Welcome to the BioComputing Hypertext Coursebook
Welcome to the BioinforMatrix
Welcome to the Cytokines Web
Welcome to the GenomeWeb Genome Databases
Welcome to the GenomeWeb Prokaryotic Genome Data
Welcome to the IBM Life Sciences Web Lecture Serie
Welcome to the Ribosomal DNA Primer Database
Welcome to the Staden Package WWW site
wetlab protocols
What is Java? - A Word Definition From the Weboped
What to do with Protein Sequence
Wilde's WWW Online Glossary: J2SE
Windows Unix-Linux Programming System tools Web-In
wisegeek.com
wordIQ Dictionary
WORKSHOP ON BIOINFORMATICS AND COMPUTATIONAL BIOLO
www.bio.davidson.edu
www.csupomona.edu ppts and other files
www.downseek.com
www.nerdbrains.com
www.spiderpro.com
www.systems-biology.org
XELOPES Library - Support
XML Bible
XML for Molecular Biology as compiled by Paul Gord
XML-biology links
xray.bmc.uu.se/Courses
yolinux

Analysis Tools

DNA Sequence Analysis Tools

Restriction, Detect repeats & unsual Patterns
  • Webcutter (Restriction analysis)

  • RepeatMasker (Search interspersed repeats and low complexity sequences)

  • dnadot (Find regions of similarity in two sequences and repeats within a single sequence at Colorado State University, USA)

  • LALIGN (Finds multiple matching subsegments in two sequences at EMBnet, Swiss node)

  • Tandem Repeats Finder (at Mount Sinai School of Medecine, NY, USA)

  • Dot Plot (Compare a large sequence with itself at Virtual Genome Center)

  • Blast 2 Sequences (Compare two sequences <150 kb to trace repeat sequences)

  • Zinfo (Detection of unusual sequences in large DNAs at Virtual Genome Center), USA)

Align Sequences
  • Align (Pairwise sequence alignment with GAP, SIM (DNA or protein alignment), NAP, LAP2 (DNA-protein alignment) or GAP2 (DNA-cDNA alignment)

  • ClustalW (at EBI, UK)

  • Launcher: multiple alignment (Choose from different alignment applications at Bailor College of Medecine, Houston, Tx, USA)

  • CINEMA (Colour INteractive Editor for Multiple Alignments at BCM group, UK)

  • MAP (Multiple alignment of (long) sequences without penalizing large gaps)

  • ClustalW (Multiple sequence alignment at WUSTL, USA)

  • ClustalW (at the Baylor College of Medicine, USA)

  • AMAS (Analyze multiple aligned sequences at Oxford University, UK)

Find Genes
  • Webtrans (Translation and codon usage of very large sequences at Virtual Genome Center)

  • GeneMark (Species-specific search for genes with WebGeneMark ,WebGeneMark.hmm and Heuristic GeneMarkat Georgia Institute of Technology , USA)

  • GenLang (Exon recognition at University of Pennsylvania, USA)

  • GeneMachine (Integrated comparative and predictive gene identification at NHGRI, USA)

  • AAT (Analysis and Annotation Tool for finding genes in genomic sequences at Michigan Tech, USA)

  • Sixframe (Translate DNA sequence in all 6 possible frames)

  • ORF Finder (at NCBI)

  • GeneMark (Species-specific search for genes cfr. WebGeneMark at EBI, UK)

  • GRAIL (Exon recognition USA).

  • Gene feature (Exon recognition, Promoter and Transcription Factor Binding Site Prediction, Open Reading FrameIdentification.at Baylor College of Medicine (USA):

  • NetPlantGene (Prediction of splice sites in Arabidopsis at CBS, Denmark)

Find Transcriptional elements
  • SignalScan (Identification of transcriptional elements in <100 kb DNA sequences < 100 kb at BIMAS, University of Minesota, USA)

  • FirstEF (first-exon and promoter prediction program for human DNA at CSHL, USA)

Find t RNA
  • tRNAscan-SE (Search for tRNA genes in genomic sequence at Washington University, St Louis, US)

  • FAStRNA (Predict potential tRNA genes in genomic sequences at Institut Pasteur, Paris, France)

Other Tools
  • CountCodon (Analyse codon usage in protein coding sequence at Kazuasa DNA Research Institute, Jp)

  • DNA folding server (Fold secondary structures)

  • Netprimer (Free online primer analysis at Premier Biosoft Int., Ca, USA)

  • IMGT/V-QUEST an interactive tool for immunoglobulin and T cell receptor sequence analysis

Protein Function Assignment

Search Pattern, motif, Profiles domains, families
  • ScanProsite (Search a protein sequence against PROSITE pattern database at ExPASy, CH)

  • PPSearch (Search a protein sequence against PROSITE pattern database with graphical output at EBI, UK)

  • FingerPRINTScan (Search a protein sequence against protein motif fingerprints database PRINTS )

  • Scansite (Prediction of protein signaling sequence motifs at HIM, Boston, USA)

  • SearchPfam at Wustl or EBI (Search a protein against Pfam domain/family database)

  • CD-Search (Search a protein against CDDdomain database, including Pfam and SMART, with RPS-BLAST at NCBI, USA)

  • eMOTIF Search (Assign putative function to new proteins by sequence comparison with IDENTIFY motif database at Stanford University, USA)

  • PROCAT (Search a protein structure agains the PROCAT database of 3D enzyme active site templates)

  • Meta-MEME (motive buiding at San DiegoSupercomputer Centre, SDSC, Ca, USA)

  • eMOTIF Maker (Generate motifs that describe protein families or superfamilies ats Stanford University, USA)

  • Modules (mobile protein domains database)

  • HSSP (Database of homology-derived structures and sequences of proteins at EBI)

  • eMATRIX Search (Function prediction by sequence analysis using minimal-risk scoring matrices at Stanford University, USA)

  • PROSCAN (Search a protein sequence against PROSITE pattern database allowing mismatches at PBIL, Lyon, Fr)

  • PFSCAN (Search protein against different profile databases at ISREC; also searches PROSITE and Pfam patterns)

  • BLOCKS Search (Search a protein againstBLOCKS database; also searches PRINTS)

  • DART (Domain Architecture Retrieval Tool at NCBI, USA)

  • InterProScan or InterPro Search (Search a protein against the integrated protein domainsand functional sites database InterPro at EBI, UK)

  • COGnitor (Search a protein agains the COGdatabase at NCBI)

  • iProCass Search (Search a protein against PIR's integrated protein class database at Georgetown University, USA)

  • SMART (Simple Modular Architecture Research Tool at EMBL; also searches Pfam)

  • MEME (Multiple EM for Motive Elicitation: Motive discovery at San Diego Supercomputer Centre, SDSC, Ca, USA)

  • ProDom (Protein domain database at Toulouse, Fr)

  • DOMO (homologous protein domain families database)

  • SBASE (Protein domain library at ICGEB, It)

  • 3Motif (Find protein (domain)s with defined 3D motifs at Stanford University, USA (runs only with Netscape and Chime plugin))

  • GeneQuiz (Automated analysis of protein sequences at EMBL)

Search, computation & analysis of pathways
  • KEGG (Search and computation tools at KEGG pathway database, Kyoto, Jp)

  • aMAZE (Query tools for pathway analysis at EBI, UK)

Protein-Protein interactions

Protein Annotation
  • PAA (Protein Annotator's Assistant at EBI, UK)

  • Artemis (Free (large-) DNA sequence viewer and annotation tool at the Sanger Center, UK)

Automatic alert for related new sequence
  • Sequence Alerting System (E-mail alert for daily searched new homologues of query sequence at EMBL, Heidelberg)

  • Swiss-Shop (Automatically receive alerts upon new submissions of related protein sequences)

  • PubCrawler (Automated alerting service that scans daily updates to PubMed and GenBank databases at Trinity College Dublin, Ireland)

  • Microbial Genomes Notification (Receive notifications by e-mail about new complete genomes in GenBank)

RNA Analysis Tools
  • RNA World (Links to RNA resources from IMB Jena Biocomputing Group, Jena, Germ.)

Protein sequence & Structure

Physiochemcial Properties
  • ProtParam (Calculate aa comp, MW, pI, extinction coefficient at ExPASy, CH)

  • ProTherm (Thermodynamic Database for Proteins and Mutants, Jp)

Analyse Primary Sequence
  • ProtColourer (Make colour-coded representation of an amino acid sequence at EBI)

  • ProtScale (Hydrophobicity, other conformational parameters, etc. at ExPASy)

  • SignalP (Prediction of peptide signal sequence at CBS, Denmark)

  • TargetP (Prediction of subcellular localization at CBS, Denmark)

  • NetOGlyc (Prediction of O-glycosylation sites in mammalian proteins at CBS, Denmark)

  • NetPhos (Prediction of phosphorylation sites in eukaryotic proteins)

  • Helical Wheel (Representation of alpha-helical peptides)

  • Hydropathy plots (At Pensylvania State University, Department of Biochemistry and Molecular Biology)

  • SAPS (Statistical Analysis for charge clusters, repeats, hydrophobic regions, compositional domains etc. at ISREC, CH)

  • PSort (Prediction of signal sequence, transmembrane regions and protein localization, IMCB, Jp)

  • DGPI (Prediction of GPI-anchor and cleavage sites, University of Geneva, CH)

  • Scansite (Prediction of protein signaling sequence motifs at HIM, Boston, USA)

  • Other primary sequence analysis tools at ExPaSy

Alignment
  • Blast 2 Sequences (Alignment of two protein sequences using BLAST at NCBI, USA)

  • ClustalW (Multiple sequence alignement at WUSTL, USA)

  • Align (Pairwise sequence alignment with GAP, SIM (DNA or protein alignment), NAP, LAP2 (DNA-protein alignment) or GAP2 (DNA-cDNA alignment)

  • AMAS (Analyze multiple aligned sequences at Oxford University, UK)

  • CINEMA (Colour INteractive Editor for Multiple Alignments at BCM group, UK)

  • SIM (Alignment of 2 protein sequences at ExPASy, Switzerland)

  • ClustalW (at EBI, UK)

  • ClustalW (at the Baylor College of Medicine, USA)

  • MAP (Multiple alignment of (long) sequences without penalizing large gaps

  • Launcher: multiple alignment (Choose from different alignment applications at Bailor College of Medecine, Houston, Tx, USA)

  • BOXSHADE (Software for visual information on aligned regions at ISREC, Switzerland)

Predict Secondary Structure
  • TMpred (Prediction of membrane-spanning regions and their orientation at ISREC)

  • SOSUI (Prediction of Transmembrane Regions, JP)

  • DAS (Prediction of transmembrane regions in prokaryotes using the Dense Alignment Surface method, Stockholm University)

  • TopPred2 (Topology prediction of membrane proteins at the Institut Pasteur, Paris, France)

  • JPred (Protein secondary structure prediction at EBI)

  • HNN (Hierarchical Neural Network secondary structure prediction at NPS@, Lyon, France)

  • nnPredict (Protein secondary structure prediction at UCSF, CA, USA)

  • BTPRED (Prediction of beta-turns at UCL, UK)

  • PairCoil (Prediction of coiled Coil regions, Bergers method)

  • TOPS (Protein topology cartoon generation at EBI, UK)

  • TMHMM (Prediction of transmembrane helices in proteins at CBS, Denmark)

  • PSort (Prediction of signal sequence, transmembrane regions and protein localization, IMCB, Jp)

  • HMMTOP (Prediction of transmembrane helices and topology of proteins at Hungarian Academy of Sciences)

  • PredictProtein (Protein secondary structure prediction at EMBL)

  • Predator (Secondary structure prediction from single or multiple sequences at EMBL, Heidelberg)

  • PSIpred (Protein secondary structure prediction at Brunel University, UK)

  • Other secondary structure prediction toolsat ExPASy

  • Coils (Prediction of coiled Coil regions Lupas' method at EMBnet-CH)

  • MultiCoil (Prediction of coiled coil regions as dimeric or trimeric assemblies at WI , USA)

Analyse & Model 3D Structure

3D Viewers
  • RasMol (Free offline 3D viewer. Download )

  • Chime (Browser plugin for structure view from MDL Chemscape)

  • Cn3D (Browser plugin for structure view used in ENTREZ/STRUCTURE from NCBI)

3D Analysis
  • DOMPLOT (Generate schematic diagrams of the structural domain organisation annotated by ligand contacts at University College London, UK)

  • GenTHREADER (Sequence profile based fold recognition on PSIpred server at Brunel University, UK)

  • 123 (Fold prediction by aligning (threading) to a (set of) structure(s)

  • DALI (Automated Protein Structure Alignment at EBI,UK)

  • LIBRA (LIght Balance for Remote Analogous proteins: search compatible structure of a target sequence by threading at NIG, Jp)

  • MolSurfer (Calculate and navigate protein-protein interfaces at EMBL, Heidelberg)

3D Homology Modelling
  • Swiss-Model (Automated protein modeling server at ExPASy, Switzerland)

  • FAMS (Fully Automated Modeling Service at Kitasato University, JP)

  • 3D-Jigsaw (Comparative modeling server at Imperial Cancer Research Fund, London, UK )

  • Meta PP (Collection of structure prediction services at Columbia University, USA)

Phylogenetic Analysis

Mutiple sequence alignment
  • ClustalW (Multiple sequence alignement at WUSTL, USA)

  • Launcher: multiple alignment (Choose from different alignment applications at Bailor College of Medecine, Houston, Tx, USA)

  • BOXSHADE (Software for visual information on aligned regions at ISREC, Switzerland)

  • TaxPlot (3-way comparisons of genomes based on encoded proteins at NCBI)

Organism classification

Microarray data analysis

Microarray data analysis