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The game where the Pokemon was captured will determine which of these lines you are interested in.
For all Legendaries in every Pokémon game, you will look for PIDs created by Method 1.
For 4th Generation games, you will look for PIDs created by Method 1.
For wild Pokemon in 3rd Generation games you will look for PIDs created by Methods 1, 2, 3, or 4.
Ability Description: http://www.smogon.com/ingame/rng/pid_iv_creation#finding_ability_from_pid
Gender Description: http://www.smogon.com/ingame/rng/pid_iv_creation#finding_gender_from_pid