Publications

 
 
 
Department of Ecology and Evolutionary Biology,
C127 Ramaley Hall, University of Colorado-Boulder
Campus Box 334, Boulder, CO 80309-0334
Phone: (402) 370-6749
Fax: (303) 492-8699
Smith Lab Home
 
 
Books
 
Baum, D. A., and S. D. Smith. 2013. Tree-Thinking: An Introduction to Phylogenetic Biology. Roberts & Co., Greenwood Village, Colorado.
 

Selected articles
 

Smith, S. D. 2014. Quantifying color variation: improved formulas for calculating hue with segment classification. Applications in Plant Sciences 2: 1300088.

Smith, S. D., S. Wang, and M. D. Rausher. 2013. Functional evolution of an anthocyanin pathway enzyme during a flower color transition.  Molecular Biology and Evolution 30: 602-612.

Weisrock, D. W, S. D. Smith, L. M. Chan, K. Biebouw, P. M. Kappeler, and A. D. Yoder. 2012. Concatenation and concordance in the reconstruction of mouse lemur phylogeny: an empirical demonstration of the effect of allele sampling in phylogenetics. Molecular Biology and Evolution 29: 1615-1630.

Smith, S. D., and S. Leiva G. 2011. A new species of Iochroma (Solanaceae) from Ecuador. Novon 21: 491-495.

Johnson, M. T. J., R. G. FitzJohn, S. D. Smith, M. D. Rausher, and S. P. Otto. 2011. Loss of sexual recombination and segregation is associated with increased diversification in evening primroses. Evolution 65: 3230-3430.

Smith, S. D., and M. D. Rausher. 2011. Gene loss and parallel evolution contribute to species difference in flower color.  Molecular Biology and Evolution 28: 2799-2810. 

Rosas-Guerrero, V., M. Quesada, W. Scott Armbruster, R. Pérez-Barrales and S. D. Smith. 2011. Influence of pollination specialization and breeding system on floral integration and phenotypic variation in Ipomoea. Evolution 65: 350-364. **recommended by Faculty of 1000
 
Smith, S. D., R. E. Miller, S. P. Otto, R. G. FitzJohn and M. D. Rausher. 2010. The effects of flower color transitions on diversification rates in morning glories (Ipomoea subg. Quamoclit, Convolvulaceae). Pp. 202-226 in M. Long, H. Gu & Z. Zhou, Darwin's Heritage Today. Higher Education Press, Beijing, China.
 
Smith, S. D. 2010. Using phylogenetics to detect pollinator-mediated floral evolution. New Phytologist 188: 354-363.
 
Johnson, M. T. J., S. D. Smith and M. D. Rausher. 2010. Effects of plant sex on range distributions and allocation to reproduction. New Phytologist 186: 769-779. 
 
Smith, S. D., C. Ané, and D. A. Baum. 2009. Macroevolutionary tests of pollination syndromes: A reply to Fenster et al. Evolution 63: 2763-2767.  Erratum
 
Johnson, M. T. J., S. D. Smith and M. D. Rausher. 2009. Plant sex and the evolution of plant defenses against herbivores. PNAS 106: 18079-18084. 
 
Smith, S. D., S. J. Hall, P.R.S. Izquierdo and D. A. Baum. 2008. Comparative pollination biology of sympatric and allopatric Andean Iochroma (Solanaceae).  Ann. MO Bot. Gard. 95: 600-617. 
 
Paape, T., B. Igic, S. D. Smith, R. Olmstead, L. Bohs and J. R. Kohn. 2008. A 15-Myr-old genetic bottleneck. Mol. Biol. Evol. 25: 655-663. 
 
Smith, S. D., C. Ané, and D. A. Baum. 2008. The role of pollinator shifts in the floral diversification of Iochroma (Solanaceae). Evolution 62: 793-806. 
 
Ané, C., B. Larget, D. A. Baum, S. D. Smith and A. Rokas. 2007. Bayesian estimation of concordance among gene trees. Mol. Biol. Evol. 24: 412-426.
 
Smith, S. D., and D. A. Baum. 2006. Phylogenetics of the florally diverse Andean clade Iochrominae (Solanaceae). Am. J. Bot. 93: 1140-1153.
 
D. A. Baum, S. D. Smith and S. S. Donovan. 2005. The tree-thinking challenge. Science 310: 979-980. Tree-thinking quizzes! 
 
 
 

For a complete list, see my CV.

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Stacey Smith,
Dec 23, 2011, 3:47 PM
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Stacey Smith,
Dec 12, 2011, 7:54 AM
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Randi Griffin,
Sep 29, 2010, 1:17 PM
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Stacey Smith,
Feb 5, 2013, 7:45 AM
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Stacey Smith,
Jan 2, 2011, 3:42 PM
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Randi Griffin,
Sep 29, 2010, 1:15 PM
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Randi Griffin,
Sep 29, 2010, 1:26 PM