Home‎ > ‎

R Scripts

These scripts provide examples of fitting models using the R package "unmarked" and WinBUGS. They are self-contained in the sense that they will install "unmarked" and download data from this site. You must have WinBUGS installed however.
SelectionFile type iconFile nameDescriptionSizeRevisionTimeUser
ċ

Download
Multi-season occupancy   4k v. 8 Apr 6, 2010, 5:08 AM Richard Chandler
ċ

Download
More on multi-season occupancy models. Emphasis on derived parameters and formulation in WinBUGS.  7k v. 3 Dec 16, 2009, 9:34 AM Richard Chandler
ċ

Download
Known-fate survival models  4k v. 2 Dec 1, 2009, 7:41 AM Richard Chandler
ċ

Download
Cormac-Jolly-Seber survival model. Plus Bayesian model selection and goodness-of-fit examples.  5k v. 2 Dec 10, 2009, 6:19 AM Richard Chandler
ċ

Download
Overview of what's ahead   6k v. 11 Apr 3, 2010, 7:42 AM Richard Chandler
ċ

Download
R basics and logistic regression   8k v. 7 Apr 3, 2010, 7:46 AM Richard Chandler
ċ

Download
Single-season occupancy model    4k v. 8 Apr 6, 2010, 4:08 AM Richard Chandler
ċ

Download
Single-season occupancy model with covariates    5k v. 4 Apr 3, 2010, 7:51 AM Richard Chandler
ċ

Download
N-mixture model of abundance/density. aka binomial-mixture model.      6k v. 6 Apr 6, 2010, 4:43 AM Richard Chandler
ċ

Download
Multinomial-mixture models of abundance   3k v. 4 Apr 6, 2010, 4:47 AM Richard Chandler
ċ

Download
More distance-sampling. And N-mixture model with trend estimation.   5k v. 5 Apr 6, 2010, 4:56 AM Richard Chandler
ċ

Download
Model-averaging and maximum-likelihood. Very random.   4k v. 4 Apr 6, 2010, 4:58 AM Richard Chandler
ċ

Download
Script used to simulate many of the datasets used in this class.  16k v. 1 Dec 10, 2009, 6:26 AM Richard Chandler
Comments