Readings

This is a collection of interesting papers dealing with a variety of topics in network theory. (For brevity, I am only including the first author and the title of the paper)

1. Empirical Network Analysis

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2. Models of Graph Formation

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4. Cascades and Epidemics

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5. Consensus Dynamics and Gossip Algorithms

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6. Synchronization in Dynamical Networks

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7. Opinion Dynamics and Learning

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8. Networked Markov Chains


9. Control-Theoretic Topics

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10. Synthesis and Design of Networks


11. Applications

Applications in social networks:
Applications in viral spreading:
Application in financial/economic networks:
Applications in biological neuronal networks 
Applications in protein and genetic networks:
  • L. Wong, Using Biological Networks in Protein Function Prediction and Gene Expression Analysis
  • Milo, R., S. Shen-Orr, et al. "Network Motifs: Simple Building Blocks of Complex Networks." Science 298 (2002): 824-827
  • T. Witkop, Extension and Robustness of Transitivity Clustering for Protein-Protein Interaction Network Analysis 
  • U. Alon, Network Motifs: Theory and Experimental Approaches
Applications in chemical reaction networks

12. Mathematical Foundation
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