To Download: Click Here

NanoProfiler v1.2 (endpoint-dependent analogues identification software) is a tool to predict respective property/endpoint of nanoparticle’s using nano-QSAR models present in provided database (inside "Data" folder), which are already reported in the literature, and then to perform clustering to find analogues based on respective predicted endpoint. We have also included three more clustering methods i.e. k-Medoids algorithm (slow and exhaustive; searches best ‘k’ medoids), modified k-Medoid (fast; searches optimum ‘k’ medoids), Euclidean distance-based method, for analogues identification. 

To Download and Run the Program

Click on the download link above (it will direct you to google drive) and then press "ctrl + S (Windows) or cmd+S (Macs)" to save as zip file. Extract the .zip file and click on .jar file to run the program.

Note: The program folder will consist of three folders "Data", "Lib" and "Output". For user convenience, user may keep input files in "Data" folder and may save output file in "Output" folder."Lib" folder consists of library files required for running the program. Check the format of input file (.xlsx/.xls/.csv) before using the program (sample file is provided in Data Folder). *Manual is provided in the program folder.

File Format: Compound number (first column), Descriptors (Subsequent Columns)

Reference Articles for Nano-Profiler Tool

  • Ambure, Pravin, Rahul Balasaheb Aher, Agnieszka Gajewicz, Tomasz Puzyn, and Kunal Roy. "“NanoBRIDGES” software: Open access tools to perform QSAR and nano-QSAR modeling." Chemometrics and Intelligent Laboratory Systems 147 (2015): 1-13.