BIOINFORMATICS‎ > ‎FACULTY‎ > ‎

Dr. J. RAMALINGAM



                                                                                             
PUBLICATIONS




2017

  • Ramalingam,J., P. Savitha, G. Alagarasan, R. Saraswathy and R. Chandrababu.2017. Functional Marker Assisted Improvement of Stable Cytoplasmic Male Sterile Lines of Rice for Bacterial Blight Resistance. Frontiers in Plant Science. 8:1131. doi: 10.3389/fpls.2017.01131
  • Sakthivel K., R.K. Gautam, K. Manigundan, Reena Singh , J. Ramalingam, G.S. Laha, A. Kumar and R. Velazhahan. 2017. The host background of rice influences the resistance expression of a three gene pyramid (xa5+xa13+Xa21) to bacterial blight (Xanthomonas oryzae pv. oryzae) pathotypes of Indian mainland and Bay islands. Plant Breeding,136: 357–364

 


2015

  • Jadhav.K.P.,, Tamilarasi. P.M.,, Saykhedkar,G.R , Senthil,N, Raveendran,M and J.Ramalaingam.2015. Moleuclar taggeing of sorghum downy mildew (Peronosclerospora  sorghi) disease resistance loci  in maize  (Zea  mays  L.). International Journal of Agriculture Sciences,7: 652-657.
  • Archana.P.,S.Subashini, L. Arul and J. Ramalingam. 2015. Identificationof Novel Inhibitors for Tobacco Mosaic Virus Infection in Solanaceae Plants. Advances in Bioinformatics, (DOI.org/10.1155/2015/198214)
  • Dhivya,  A .B, S. Subashini, R. Chandrababu and J. Ramalingam. 2015. Establishment of Millet DB: TNAU released Millet varieties with their morphological traits. International Journal of Computer Applications, 2015, 111 (14): 24 – 26.
 

2013

  • Mahalingam. A, R. Saraswathi and J. Ramalingam.2013.Simple sequence repeat (SSR) markers for assessing genetic diversity among the parental lines of hybrid rice (Oryza sativa L.). Afr. J. Biotech.12: 5105-5116.

  • Mahalingam. A, R. Saraswathi ,S.Robin,T.Marimuthu,T.Jayaraj and J. Ramalingam.2013. Genetics of stability and adaptability of rice hybrids (Oryza sativa L.) for grain quality traits. Afr. J. Agric. Res. 8(22): 2673-2680.

 





 

2010
  • Bharani, M., P. Nagarajan, R. Rabindran, R. Saraswathi,P. Balasubramanian and J. Ramalingam. 2010. Bacterial leaf blight resistance genes (Xa21, xa1-1 and xa5) pyramiding through molecular marker assisted selection into rice cultivars. Archives of Phytopathology and Plant Protection, 43:  1032-1043.
  • Perumalsamy,S., M.Bharani, P.Sudha, P. Nagarajan, L. Arul, R. Saraswathi, P. Balasubramanian and J. Ramalingam. 2010. Functional markers assisted selection for bacterial leaf blight resistance genes in rice (Oryza sativa L.).Plant Breeding,129: 400-406.
  • J. Ramalingam, LArul, N Sathishkumar, D Vignesh , K Thiyagarajan  and R Samiyappan.2010. TNAURice: Database on rice varieties released from Tamil Nadu Agricultural University. Bioinformation ,2010, 5(6): 264- 265
  • Ramya ,M., M. Raveendran , S.Sathiyamoorthy and J. Ramalingam 2010. Insilico analysis of  drought tolerant genes in rice.   Int J Biol Med Res. 1(3): 36-40.
 

2009
  • Perumalsamy,S., M.Bharani, P.Sudha, P. Nagarajan, L. Arul, R. Saraswathi, P. Balasubramanian and J. Ramalingam. 2009. Functional markers assisted selection for bacterial leaf blight resistance genes in rice (Oryza sativa L.).Plant Breeding, 129: 400-406.


2006
  • Ramalingam, J., M. S. Pathan, Q. Feril, Miftahudin, K. Ross, X.-F. Ma, A. A. Mahmoud, J. Layton, M. A. Rodriguez-Milia, T. Chikmawati, B. Valliyodan, R. Skinner, D. E. Matthews, J. P. Gustafson, and H. T. Nguyen. 2006. Structural and functional analyses of the wheat genomes based on expressed sequence tags (ESTs) related to abiotic stresses. Genome, 49 (10): 1324-1340.
 



2004
 
  • Miftahudin, K. Ross, X.-F. Ma, A. Mahmoud, J Layton, M. Rodriguez, T. Chikmawati, J. Ramalingam, O. Feril, M. S. Pathan,     G. Surlan Momirovic, S. Kim, K. Chema, P. Fang, L. Haule, H. Struxness, J Birkes, C. Yaghoubian, R. SKinner, V. Nguyen, L. Qi, A.M. Linkiewicz, J Dubcovsky, ED. Akhunov, J Dvorak, M. Dirirligi, K.S. Gill, J Peng, N.LV Lapitan, T. Drake, M.E. Sorrells,     K.G. Hossain, V. Kalavacharla, S.F. Kianian, G. Lazo, S. Chao, 0.0. Anderson, B.S. Gill, J Gonzalez, E. Wennerlind, JA. Anderson, D-W. Choi, R.D. Fenton, T.J. Close, P.E. McGuire, C.O. Qualset, H. T. Nguyen& JP. Gustafson.2004. Analysis of wheat EST loci on wheat chromosome 4. Genetics, 168 (2): 651-663

 
2003
  • Ramalingam, J., C. M. Vera Cruz, K. Kukreja, J. M. Chittoor, J.-L. Wu, S. W. Lee, M. Baraoidan, M. L. George, M. B. Cohen,        S. H. Hulbert, J. E. Leach, dnd H. Leung. 2003. Candidate defense genes from rice, barley, and maize and their association with qualitative and quantitative resistance in rice. Molecular Plant Microbe Interactions, 16(1): 14-24.
 

2002
  • Ramalingam, J., H.S. Basharat and G. Zhang. 2002. STS and microsatellite marker-assisted selection for bacterial blight resistance and waxy genes in rice, Oryza sativa L. Euphytica,127:255-260.
  • Bai, J., LA Pennill, J. Ning, SW. Lee, J. Ramalingam, C.R. Webb, B. Zhao, Q. Sun, J.C.Nelson, J.E. Leach and S.H. Hulbert. 2002. Diversity in Nucleotide Binding Site-leucine-Rich Repeat Genes in Cereals. Genome Research, 12: 1871-1884.

2001
  • Ramalingam, J., H.S. Basharat and G. Zhang. 2001. Polymorphism of DNA markers linked to bacterial blight resistance genes in useful rice germplasm. IRRN, 26(2): 23-24.

                                                                                                 PROJECTS        

On-Going Projects Details:
 
 S. No Project Name  Funding Agency  Date of Completion Budget
1 Marker assisted selection for Phytophthora and powdery mildew resistance and effective nodulation in soybean (Glycine max L.Merr.) (PI)
 DST

Oct, 2017

27.05 lakhs   
                                                                    
Completed Projects Details:

 S. No Project Name  Funding Agency  Date of Completion Budget
1 Pyramiding of bacterial blight resistant genes in rice through marker assisted selection (PI)
 DST

March, 2008

9.84 lakhs   
 2 Developing bacterial blight resistance and physiologically superior high yielding rice variety through marker assisted selection (PI)
  DBT

  July, 2012
   
25.64 lakhs    
 3 Development of biotic stress resistant rice through marker-assisted breeding (CO-PI)   DBT  Sep, 2014 63.23 lakhs