FlowgramFixer is an improved basecaller for the IonTorrent sequencing platform, which reduces error rates, and generates more uniquely aligned reads and more high quality reads than the default base calling algorithm implemented by IonTorrent in TorrentSuite. It is free and open source.
Questions, comments and requests can be directed to:
David Golan: davidgo5 at post dot tau dot ac dot il
Paul Medvedev: pashadag at cse dot psu dot edu
Currently, FlowgramFixer is in beta version, meaning that using it is somewhat involved. FlowgramFixer's source code and detailed usage instructions can be found on the project's GitHub page.