Spike2

This site is part of the Stein_Lab|Stein Lab website.

For data recording and analysis, we mainly use Spike2 (CED, UK): http://www.ced.co.uk/pru.shtml?spk7wglu.htmhttp://www.ced.co.uk/pru.shtml?spk7wglu.htm and our own data analysis scripts.

 

Here is a list of scripts that we use (provided without warranty - it is your own responsibility to take precautions to prevent damage to your computer or data).

Files can be downloaded from our file container.

 

  • The_Crab_Analyzer.s2s|The Crab-Analyser by Mark Beenhakker (markbeen@stanford.edu) and Wolfgang Stein (wstein @ neurobiologie.de)
  • window_discriminator.s2s| Window Discriminator by Wolfgang Stein (wstein @ neurobiologie.de)
  • text2channel.s2s| Script for adding / deleting text to/from keyboard channel by Wolfgang Stein (wstein @ neurobiologie.de)
  •  find_PSPs_enhanced_using_trigger_channel.s2s|Script for finding EPSPs in Neurons by Wolfgang Stein (wstein @ neurobiologie.de) and Tina Eberle (tina@neurobiologie.de)
  •  convert_event_to_sequencer.s2s|Script for converting events to sequencer output by Wolfgang Stein (wstein @ neurobiologie.de)
  •  EPSP_amplitude_measurement.s2s|Script for measuring amplitude of EPSPs by Wolfgang Stein (wstein @ neurobiologie.de)
  •  subtract_two_resultfiles.s2s|subtract two result files from another by Wolfgang Stein (wstein @ neurobiologie.de)
  •  copy_waveformchannel_whole-file_variable_insert.s2s|copy waveform channel from one file to another by Wolfgang Stein (wstein @ neurobiologie.de)
  •  create_empty_file.s2s|pseudo-empty data file (600sec) by Wolfgang Stein (wstein @ neurobiologie.de)
  •  kill_artifacts_intra_average_04_2012.s2s|Remove artifacts from intra or extracellular recordings by Wolfgang Stein (wstein @ neurobiologie.de)
  •  Find_Peaks_in_extracellular_recording.s2s|find spikes in extracellular recording by Wolfgang Stein (wstein @ neurobiologie.de) and Farzan Nadim (farzan @ cancer.rutgers.edu)
  •  dynamic_clamp_leak.zip|Leak subtraction with dynamic clamp by Wolfgang Stein (wstein @ neurobiologie.de)
  •  muscle_stimulation.s2s|muscle stimulation (EJPs) by Wolfgang Stein (wstein @ neurobiologie.de)
  •  measure_burstduration_frequenz_spikeanzahl_in_bursts.s2s|find bursts and measure burstduration, spikefrequency and spikenumber by Wolfgang Stein (wstein @ neurobiologie.de) and Carmen Smarandache (carmen @ neurobiologie.de)
  •  Fit_exp_decay.s2s|Fit exponential function to series of EJPs by Wolfgang Stein (wstein @ neurobiologie.de)
  •  Fit_exp_decay_ohne_drumrum.s2s|Fit exponential function to series of EJPs (copies only timeconstant to clipboard) by Wolfgang Stein (wstein @ neurobiologie.de)
  •  identify_spike_by_peak-direction.s2s|Identify spikes on extracell. recording by direction of amplitude peak by Wolfgang Stein (wstein @ neurobiologie.de)
  •  Phase-analysis_with_spike-count+frequencies.s2s|advanced phase analysis with spike activities + firing frequencies by Wolfgang Stein (wstein @ neurobiologie.de)
  •  multisweeep_07_10.s2s|Multisweep (XY Plot) of recordings by Wolfgang Stein (wstein @ neurobiologie.de)
  •  enhanced_trigger.s2s|Create event channel (trigger) from waveform channel - enhanced version with Spike-peak detection by Wolfgang Stein (wstein @ neurobiologie.de)
  •  phaseplot.s2s|Plot a phase diagram by Wolfgang Stein (wstein @ neurobiologie.de)
Subpages (1): Spike2 scripts Stein Lab
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