F-nsSNP-Syn-Gen

A database of experimentally validated functional nsSNPs in human synaptic genes






dbSNP

Gene

PolyPhen

SIFT

SNPeffect

LS-SNP

SNPs3D

 PMID
Funct

rs6265

BDNF

benign

damaging

deleterious

benign

benign


12553913
 

rs4680

COMT

benign

tolerated

deleterious

benign

deleterious

 

rs7412

APOE

damaging

damaging

deleterious

benign

deleterious

 

rs429358

APOE

benign

tolerated

deleterious

deleterious

deleterious

 

rs5030732

UCHL1

damaging

benign

benign

no

benign

 
12408865

rs17110563

TPH2

damaging

no

deleterious

benign

deleterious

 

rs1047552

APH1B

benign

damaging

benign

benign

deleterious

 

rs6267

COMT

benign

tolerated

deleterious

deleterious

deleterious

 
 rs74942016 NRG1      18626010


dbSNP

Gene

 MAF
CEU

PolyPhen

SIFT

SNPeffect

LS-SNP

SNPs3D

 PMID
    Funct

rs6355


SLC6A4
 





18957375


Diego Forero, MD, PhD(c)

Reference:
Synaptogenomics: analysis of genomic features of human synaptic genes
Forero DA. In preparation.
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