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Python Fundamentals
Welcome to the Python Fundamentals for Bioinformatics Workshop!
This workshop will introduce you to the basics of Python programming and how to apply it to manipulate biological data and bioinformatics tasks.
You'll learn coding skills to work with biological data and solve bioinformatics challenges using Python
This workshop explores basic concepts of computer programming using Python including :
This workshop explores basic concepts of computer programming using Python including :
1.Syntax
2.Variables
3.Data types
4.Operators
5.Strings
6.String manipulation
7.Conditionals
8.Loops
9.Collections
(List, Tuple, Set, Dictionary)
10.Exception handlers
11.Object-oriented programming
12.Files handling
13.Ploting scientific graphs
All concepts will be delivered and learned through hands-on exercises, particularly for bioinformatics problems such as handling genetic sequences and parsing biological data files. Also, the advanced topic of compound screening for drug discovery will be demonstrated.
The workshop is suitable for ...
The workshop is suitable for ...
Who have no (or little) programming background
Who would like to
do coding for automate tasks
Who interests in analyzing
high-throughput data
You only need a laptop 💻 to learn in this course!
The minimum required specifications for the laptop
The minimum required specifications for the laptop
CPU: Intel core i5
or higher
RAM: 8GB
or higher
Available storage:
20GB or more
OS: Windows 10, macOS 10.14.x
or higher
Learning outcomes
Learning outcomes
you'll gain the knowledge and confidence to:
you'll gain the knowledge and confidence to:
Basic programming
using Python
Manipulate biological data
Solving basic computational
or biological challenges and automate tasks using Python
A certificate of attendance will be provided after the workshop (of those who attend >80% and get through hands-on).
Schedule
Schedule
Day
Day
Date
Date
Time
Time
Content
Content
1
July 3, 2023
9:00 - 12:00
13:00 - 16:00
16:00 - 18:00
Introduction to programming fundamentals
Syntax and Variables
Programming exercises
2
July 5, 2023
9:00 - 12:00
13:00 - 16:00
16:00 - 18:00
Data types
Operators and String manipulation
Programming exercises
3
July 7, 2023
9:00 - 12:00
13:00 - 16:00
16:00 - 18:00
Control statements: Conditionals
Control statements: Loops
Programming exercises
4
July 10, 2023
9:00 - 12:00
13:00 - 16:00
16:00 - 18:00
Collections: List, Tuples, Sets
Collections: Dictionary
Programming exercises
5
July 12, 2023
9:00 - 12:00
13:00 - 16:00
16:00 - 18:00
Half-way test
Control statement: Exceptions handlers
Programming exercises
6
July 17, 2023
9:00 - 12:00
13:00 - 16:00
16:00 - 18:00
Functions and Modules
Object-oriented programming
Programming exercises
7
July 19, 2023
9:00 - 12:00
13:00 - 16:00
16:00 - 18:00
Biological data and files handling
Plotting and Data presentation
Programming exercises
8
July 24, 2023
9:00 - 12:00
13:00 - 16:00
16:00 - 18:00
Advanced topics for bioinformatics:
Compound screening for drug discovery
Programming exercises
9
July 26, 2023
9:00 - 12:00
Project presentation
LECTURERs
LECTURERs
Bioinformatics and Systems Biology Program, School of Bioresources and Technology, King Mongkut’s University of Technology Thonburi (KMUTT)
Expertise : Microbiome analysis, High-throughput data analysis, Bioinformatics
Bioinformatics and Systems Biology Program, School of Bioresources and Technology, King Mongkut’s University of Technology Thonburi (KMUTT)
Expertise : Computational Biology, Systems Biology,
Bioinformatics, Machine Learning
VENUE
VENUE
room BT-211, 2nd floor,
School of Bioresources and Technology,
KMUTT BANG KHUN THiAN CAMPUS
room BT-211, 2nd floor,
School of Bioresources and Technology,
KMUTT BANG KHUN THiAN CAMPUS
workshop fee: 13,600 baht per person
workshop fee: 13,600 baht per person
REGISTRATION
REGISTRATION
Hurry❗️Limited for only 10 seats ❗️
(first come first serve)
Registration deadline : 26 June 2023
Registration now via :
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