SpliceSTR
Embedded Files
Background
Background
Splicing
Splicing
A description of an effort and why it matters
Select different exons to create different proteins
Short Tandem Repeats
Each individual share different STR repeats
We use Percent Splice In (PSI) to describe exon skipping events in splicing
Objectives
Objectives
To design a software pipeline that reveals the relationship between STR and splicing of exons
Experiment Design
Experiment Design
Genome-wide STR Significance
Genome-wide STR Significance
Representitive spliceSTR
Representitive spliceSTR
Questions?
Feel free to email us
Yuren Dong (yud105atucsd.edu)
Ziyang Zhang(ziz361atucsd.edu)
Acknowledgements
Acknowledgements
Dr. Melissa Gymrek
Dr. Alon Goren
Dr. Bruce Wheeler
Catherine Watson
Dr. Stephanie Fotsing
Dr. Ileena Mitra
Jonathan Margoliash
Richard Yanicky
Dana Nachmanson
Workflow
Workflow
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