Software

We develop and release software tools (typically using Matlab) for the analysis of biomedical time series, targeted to the description of network systems. The following packages are freely available for downolad:

1. OIR Toolbox - parametric computation of high-order interactions A Framework for the Time- and Frequency-Domain Assessment of High-Order Interactions in Brain and Physiological Networks [Download]

2. fdPID Toolbox - frequency domain Partial Information Decomposition Matlab Tool for the spectral decomposition of interaction information, redundancy and synergy [Download]

3. CSPVARICA Toolbox - A Framework to Assess the Information Dynamics of Source EEG Activity [Download]

4. PID-LASSO Toolbox- Matlab Tool for the computation of Partial Information Decomposition based on LASSO Multivariate Model Identification [Download]

5. LMSE Toolbox - Matlab Tools for the computation of Linear Multiscale Entropy and Information Storage [Download]

6. msGC Toolbox - Matlab Tool for the computation of multiscale Granger Causality [Download]

7. msID Toolbox - Matlab Tool for multiscale Information Decomposition [Download]

8. ARres Toolbox - Matlab Tool for Computing Confidence Limits of Measures derived from Autoregressive Modeling of Time Series [Download]

9. ITS Toolbox - Matlab Tool for the computation of Information Dynamics [Download]

10. eMVAR Toolbox - Extended Multivariate Autoregressive Modelling Toolbox [Download]

11. eGC Toolbox - Matlab Tool for computing the extended Granger Causality [Download]

12. blockMVAR Toolbox - Toolbox for block-based MVAR connectivity analysis [Download]

13. cTE Toolbox - Matlab Tool for computing the Corrected Transfer Entropy [Download]

14. Time-VaryingIS Toolbox - Matlab toolbox to study the evolution over time of the Information Stored in a system under non-stationarity assumption [Download] 

15. fdIID Toolbox - Matlab Tool for a frequency-specific quantification of redundancy and synergy the study of complex systems [Download]

16. ANN-GC-Toolbox - Matlab Tool for the computation of conditional and uncondititional Granger Causality based on the combination of state-space models and Artificial neural networks [Download]

17. S-MVAR Toolbox - Matlab Tool for the identification procedure of Multivariate Autoregressive models with different penalized regression techniques [Download]

18. GICA Toolbox - Granger Causality (GC), Granger Isolation (GI) and Granger Autonomy (GA) for the assessment of bivariate causal and non-causal interactions in linear autoregressive processes [Download]

19. TEMI Toolbox - Matlab Tool for the computation of Mutual Information Rate (MIR) and Transfer Entropy Rate (TER) in continuous time between point-processes [Download]

20. CFI-MI Toolbox - MatLab Tool for the estimation of the degree of concomitant firing between two neural [Download]

21. SID Toolbox - MatLab Tool for Surrogates for Information Dynamics measures toolbox [Download]

22. unID Toolbox - univariate Information Decomposition (unID) MATLAB toolbox [Download]

23. mfPID Toolbox - Matlab toolbox for the estimation of the Partial Information Decomposition (PID) terms [Download]