Shared Models

Here you have access to a list of Models that have been shared by users of S3DB. You can either share/download the N3 files, which will have IDs associated with them, of the XML files, which will give you templates for the data models. Feel free to explore the Map of each model before importing.


 Project

Description 

File without IDs

(XML)

File with IDs

(RDF/turtle)

Rule Map



Author
The Cancer Genome Atlas    
This project was aimed at creating a representation of the data acquisition steps involved in the cancer genome atlas project
Download
Download  
Helena F. Deus
GI Clinical Trials
Description of elements associated with gastrointestinal cancer clinical trials
Download Download
 
Miria Coelho
Staphylococcus A project to describe multiple typing methods related to a molecular epidemiology dataset
Download Download
 
Maria Miragaia
 The lacOperon
 Description of the lacOperon
Download Download
 
Alexander Pacelli
Microvigine for Breast Cancer

Download Download
 
Katherine Hale, Bryan Hennesy
Molecular Epidemiology

Download Download
 
Marta Aires de Sousa
GastroIntestinal Trials

Download Download
 
Michael Lemoine


Instructions


Files without IDs

If you download a file without IDs, this means that you will import only the template for the Project, but will not replicate the actual project itself. This means that the unique identifiers will not be replicated. This is the more convinient option when you just want a template from which to strat creating your ontology.
Import these files using the button that says "Import from XML" in the Project's main page:


File with IDs

If you download the "File with IDs", this will enable you to completely replicate a project in another S3DB including the unique identifiers assigned to each data element. However, do not try to import the same file twice as this will result in overlapping IDs and may compromise the importing mechanism.You can import this to you S3DB using the "Import from N3" functionality:




ċ
GI+Clinical+Trials.s3db.xml
(33k)
Lena Deus,
Feb 2, 2011, 2:52 AM
ċ
Staphylococcus+spp.s3db.xml
(181k)
Lena Deus,
Feb 2, 2011, 3:11 AM
ċ
TCGA+alfa.s3db.xml
(10k)
Lena Deus,
Feb 2, 2011, 2:50 AM
ċ
clinical_trials.n3
(60k)
Lena Deus,
Feb 2, 2011, 2:51 AM
ċ
epi.n3
(26k)
Helena Deus,
Sep 5, 2012, 7:33 AM
ą
epi.png
(66k)
Helena Deus,
Sep 5, 2012, 7:33 AM
ċ
epi.xml
(9k)
Helena Deus,
Sep 5, 2012, 7:33 AM
ċ
gastro.n3
(58k)
Helena Deus,
Sep 5, 2012, 7:28 AM
ą
Helena Deus,
Sep 5, 2012, 7:25 AM
ċ
gastro.xml
(21k)
Helena Deus,
Sep 5, 2012, 7:25 AM
ċ
lacOperon.n3
(19k)
Lena Deus,
Feb 2, 2011, 3:18 AM
ċ
lacOperon.s3db.xml
(1k)
Lena Deus,
Feb 2, 2011, 3:18 AM
ċ
micro.n3
(36k)
Helena Deus,
Sep 5, 2012, 7:25 AM
ą
micro.png
(48k)
Helena Deus,
Sep 5, 2012, 7:25 AM
ċ
micro.xml
(16k)
Helena Deus,
Sep 5, 2012, 7:25 AM
ċ
staphylococcus.n3
(337k)
Lena Deus,
Feb 2, 2011, 3:11 AM
ċ
tcga.n3
(19k)
Lena Deus,
Feb 2, 2011, 2:35 AM
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