The latest version of the Inferelator

Inferelator_2013.3.RC2.tar.gz was used to generate results for the paper "Robust data-driven incorporation of prior knowledge into the inference of dynamic regulatory networks."

Other versions are newer and include the option to estimate transcription factor activities using prior known interactions. The Modified Elastic Net method has not been tested in those versions.

Inferelator_2015.08.05.tar.gz was used to generate results for the paper "An experimentally supported model of the Bacillus subtilis global transcriptional regulatory network."

For questions, comments and requests, join our Google Group: Inferelator announcements 
You can follow Inferelator development on GitHub: github.com/ChristophH/Inferelator
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  Mar 19, 2015, 9:49 AM Christoph Hafemeister
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  Mar 19, 2015, 9:50 AM Christoph Hafemeister
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  Nov 4, 2015, 1:27 PM Christoph Hafemeister
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