Aho lab

Community Ecology & Statistics

Office: LS 419, Phone: (208)-282-3391, email: ahoken@isu.edu

Alpine ecology

Much of my research of the last 20 years (as a graduate student and faculty member at Idaho State University) has concerned alpine ecology. This includes the use of classic methods in plant synecology and autecology, and the examination of the effect of invasive mountain goats (Oreomnos americanus) on alpine vegetation, the endophytic communities of whitebark pin (Pinus albicaulis), and even the microbial communities of the alpine soil and atmosphere.

Figs. Alpine study sites in the Absaroka-Beartooth mountains. (L to R) E. face of Cutoff Pk., looking NW from the summit of the Thunderer, looking NW from the summit of Mineral Pk., and looking S from the summit plateau of Amphitheatre Pk (photos: S. Contor, 2008-2009).

Current graduate students

Jessica Call (MS Candidate, FA 2021-)


Troy Tetreault (MS Candidate, FA 2020-)

My thesis research concerns the pollination ecology of the high alpine meadows of the Beartooth Plateau, north of Yellowstone National Park. My research framework is a combination of controlled experiments and observational data collection. With my controlled experiments, I am quantifying the dependence of dominant/characteristic alpine plant species on particular pollinators through the use of a novel exclosure design. With my observational study, I am recording metrics regarding the visitation rates and identities of insects that pollinate plants, which will be used to infer pollinator network structures and patterns of generalism/specialism.

Before attending ISU, I graduated from the State University of New York at Plattsburgh in 2019 with a bachelor’s degree in Ecology and a minor in Botany. During my undergraduate years I was also involved with research in high alpine environments and pollination ecology, specifically in the Adirondack Mountains. I also participated in research on wetland responses to forest fires and the encroachment of trees into a boreal peatland. In my free time I enjoy hiking, trail running, rock climbing, and kayaking.

Thesis publications:

  • Tetreault, T., & Aho, K. (2021). An updated insect exclosure design for pollination ecology. Journal of Pollination Ecology, 29, 249-257. (link)

Spencer Roop (co-advised PhD Candidate, FA 2020-)


Past graduate students

Aurora Bayless-Edwards (MS, FA 2019)

My MS thesis research focused on classifying plant communities in semi-arid sagebrush steppe on the Snake River Plain. Our classifications involved applications of several hierarchical and non-hierarchical cluster analysis methods evaluated by geometric and non-geometric evaluators to determine optimal community assignments. The goal of the project was a local scale map of plant communities. However, temporal and spatial changes in these communities allowed us to investigate interesting ecological processes in semi-arid communities, such as post-fire succession.

Thesis publications:

  • Aho, K. A., Weber, C. F., Christner, B. C., Vinatzer, B. A., Morris, C. E., Joyce, R., Bayless-Edwards, A. L. H. & Schmale III, D. G. (2020). Spatiotemporal patterns of microbial composition and diversity in precipitation. Ecological Monographs, 90(1), e01394. (link)


Stephanie Zorio (DA, FA 2019 )

My DA dissertation focused on plant communities in high-altitude environments and how they change over time, especially due to direct or indirect anthropogenic influence. I was given the opportunity to expand my investigations of alpine plants to include microbial diversity in soil and the near-terrestrial atmosphere via Next-Gen sequencing. I primarily used multivariate statistics and a suite of diversity metrics to detect ecologically meaningful patterns.


Roy Hill (MS, SP 2016) Insular Biogeography and Population Genetics of Dwarf Mistletoe (Arceuthobium americanum)

Lodgepole pine dwarf mistletoe (Arceuthobium americanum), is an obligate parasite of lodgepole pine (Pinus contorta). The patterns of genetic variation within A. americanum populations are largely unexplored, and of interest because of the poor gene flow characteristics of the species, due to limited dispersal abilities, and specificity to P. contorta (which itself is limited to montane islands). My MS thesis explored the genetic diversity and phylogenies of A. americanum populations using microsatellite markers developed specifically for this species.

Thesis publications:

  • Hill, R., Loxterman, J. L., & Aho, K. (2017). Insular biogeography and population genetics of dwarf mistletoe (Arceuthobium americanum) in the Central Rocky Mountains. Ecosphere, 8(5), e01810. (link)

Ehren Moler (MS, SP 2015) Fungal Ecology of Whitebark Pine Phyllospheres in the Southern Cascades

Whitebark pine (Pinus albicaulis), a species of treeline environments in the Western US, is in rapid decline due in part to the exotic fungal pathogen whitebark pine blister rust (Cronartium ribicola). My MS thesis ascertained the effect of native endophytic (within-leaf) fungal community structure, and community assembly on C. ribicola infection.

Thesis publications:

  • Moler, E. R., & Aho, K. (2018). Whitebark pine foliar fungal endophyte communities in the southern Cascade Range, USA: Host mycobiomes and white pine blister rust. Fungal Ecology, 33, 104-114. (link)

Figs (left) shows whitebark pine study sites in the mountains of South-Central Oregon. (L to R) Parent trees representing a specific type of genetic vulnerability to blister rust infection, view of Crater Lake from Watchman's Peak along the caldera rim (photos: E. Moler, 2013). Fig (right) shows Certhomas Tan and Connor Newman at the top Bonneville Peak near Pocatello, ID, collecting limber pine (P. flexilis) needles. P. flexilis is a close relative of P. albicaulis (photo: K. Aho).

The R computational environment

R is a computer language and an open source environment for statistics, data management, computation and graphics. Documentation and software can be downloaded for free here.

asbio-devel

Asbio (applied statistics for biologists) is an R package that contains functions for statistical pedagogy and biological research. Of particular interest are hundreds of graphical functions for depicting statistical concepts, many with interactive GUIs. Asbio also serves as a software companion to the biostatistical textbook: "Foundational and Applied Statistics for Biologists Using R". MAC OS users please use the newest R, and download the most recent version of XQuartz to allow implementation of tcltk GUIs. Open XQuartz before using asbio. The newest beta-tested version of asbio can be obtained from CRAN or the R console, using install.packages("asbio").

alpha versions (1.7-1): Windows Linux/Unix

plant.ecol-devel

Plant.ecol is a stripped down package containing functions for plant community ecology. It is only available at this website. The package requires plotrix, mvtnorm, and vegan.

Current releases