Publications and Reports

Publications (Many of the publications listed below can be found on N. Bouwes ResearchGate site)

Weber N., N. Bouwes­, and C. Jordan. Accepted. Spatial and temporal variation of macroinvertebrate community abundances and measurement of the food supply of stream salmonids. Journal of Freshwater Ecology 

Wheaton, J.M, N. Bouwes, P. McHugh, C. Saunders, S. Bangen, P. Bailey, M. Nahorniak, E. Wall, C. Jordan. Accepted. Upscaling Site-Scale Ecohydraulic Models to Inform Salmonid Population-Level Life Cycle Modelling and Restoration Actions – Lessons from the Columbia River Basin. Earth Surface Processes and Landforms

O´Brien, G., Wheaton, J., Fryirs, K. McHugh, P., Bouwes, N., Brierley, G., Jordan, C. Accepted. A geomorphic assessment to inform strategic stream restoration planning in the Middle Fork John Day Watershed, Oregon, USA. Journal of Maps

Conner, M. M., W. C. Saunders, N. Bouwes, and C. Jordan. 2016. Evaluating impacts using a BACI design, ratios, and a Bayesian approach with a focus on restoration. Environmental Monitoring and Assessment 188:555.

Wall, C. E., N. Bouwes, J. M. Wheaton, S. N. Bennett, W. C. Saunders, P. A. McHugh, and C. E. Jordan. 2016. Design and monitoring of woody structures and their benefits to juvenile steelhead trout (Oncorhynchus mykiss) using a net rate of energy intake model. Canadian Journal of Fisheries and Aquatic Sciences. Online access. DOI: 10.1139/cjfas-2016-0131

Bennett, S., G. Pess, N. Bouwes, P. Roni, R. E. Bilby, S. Gallagher, J. Ruzycki, T. Buehrens, K. Krueger, W. Ehinger, J. Anderson, C. Jordan, B. Bowersox, and C. Greene. 2016. Progress and Challenges of Testing the Effectiveness of Stream Restoration in the Pacific Northwest Using Intensively Monitored Watersheds. Fisheries 41:92-103.

Bouwes, N., S. Bennett, and J. Wheaton. 2016a. Adapting Adaptive Management for Testing the Effectiveness of Stream Restoration: An Intensively Monitored Watershed Example. Fisheries 41:84-91.

Bouwes, N., N. Weber, C. E. Jordan, W. C. Saunders, I. A. Tattam, C. Volk, J. M. Wheaton, and M. M. Pollock. 2016b. Ecosystem experiment reveals benefits of natural and simulated beaver dams to a threatened population of steelhead (Oncorhynchus mykiss). Scientific Reports 6:28581.

Conner, M. M., S. N. Bennett, W. C. Saunders, and N. Bouwes. 2015. Comparison of Tributary Survival Estimates of Steelhead using Cormack–Jolly–Seber and Barker Models: Implications for Sampling Efforts and Designs. Transactions of the American Fisheries Society 144:34-47.

Hough-Snee, N., A. Kasprak, R. K. Rossi, N. Bouwes, B. B. Roper, and J. M. Wheaton. 2015. Hydrogeomorphic and Biotic Drivers of Instream Wood Differ Across Sub-basins of the Columbia River Basin, USA. River Research and Applications:n/a-n/a.

Kasprak, A., N. Hough-Snee, T. Beechie, N. Bouwes, G. Brierley, R. Camp, K. Fryirs, H. Imaki, M. Jensen, G. O?Brien, D. Rosgen, and J. Wheaton. 2016. The Blurred Line between Form and Process: A Comparison of Stream Channel Classification Frameworks. Plos One 11:e0150293.

Lallement, M., P. Macchi, P. Vigliano, S. Juarez, M. Rechencq, M. Baker, N. Bouwes, and T. Crowl. 2015. Rising from the ashes: Changes in salmonid fish assemblages after 30months of the Puyehue-Cordon Caulle volcanic eruption. The Science of the Total Environment 541:1041-1051.

Macfarlane, W. W., J. M. Wheaton, N. Bouwes, M. L. Jensen, J. T. Gilbert, N. Hough-Snee, and J. A. Shivik. 2015. Modeling the capacity of riverscapes to support beaver dams. Geomorphology.

Wall, C. E., N. Bouwes, J. M. Wheaton, W. C. Saunders, and S. N. Bennett. 2015. Net rate of energy intake predicts reach-level steelhead (Oncorhynchus mykiss) densities in diverse basins from a large monitoring program. Canadian Journal of Fisheries and Aquatic Sciences.

Wheaton, J. M., K. A. Fryirs, G. Brierley, S. G. Bangen, N. Bouwes, and G. O'Brien. 2015. Geomorphic mapping and taxonomy of fluvial landforms. Geomorphology 248:273-295.


Bangen, S., J. Wheaton, N. Bouwes, C. Jordan, C. Volk, M. B. Ward. 2014. Crew variability in topographic surveys for monitoring instream fish habitat: A case study from the Columbia River Basin. Earth Surface Processes and Landforms. DOI: 10.1002/esp.3600

 

Bangen, S., J. Wheaton, N. Bouwes, B. Bouwes, C. Jordan. 2014. A methodological intercomparison of topographic survey techniques for characterizing in-stream habitat. Geomorpholgy 206:343-361.

 

Weber, N., N. Bouwes, C. Jordan. 2014. A bioenergetics approach to evaluating growth potential of O. mykiss using abundance of drifting invertebrates. Canadian Journal of Fisheries and Aquatic Sciences.  71:1158-1170 dx.doi.org/10.1139/cjfas-2013-0390

 

Pollock, M., T.J. Beechie,  J. Wheaton, C. Jordan, N. Bouwes, N. Weber, C. Volk. 2014. Channel incision evolution models that incorporate beaver and restoration activities.  BioScience 64:279-290


Rosenfeld, J. S., N. Bouwes, C. E. Wall, and S. M. Naman. 2014. Successes, failures, and opportunities in the practical application of drift-foraging models. Environmental Biology of Fishes 97:551-574. 

Pollock M, Wheaton JM, Bouwes N and Jordan CE. 2012. Working with Beaver to Restore Salmon Habitat in the Bridge Creek Intensively Monitored Watershed: Design Rationale and HypothesesNOAA Technical Memorandum, NOAA Northwest Fisheries Science Center, Seattle, WA, 108 pp. 


Ward, E. J., B. X. Semmens, D. L. Phillips, J. W. Moore, and N. Bouwes. 2011. A quantitative approach to combine sources in stable isotope mixing models. Ecosphere 2(2):art19. doi:10.1890/ES10-00190.1


Kershner, J.L, B.B. Roper, N. Bouwes, R. Henderson, and E. Archer. 2004. An analysis of stream habitat conditions in reference and managed watersheds on some federal lands within the Columbia basin. North American Journal of Fisheries Management 24:1363-1375.

Archer, E.K., B.B. Roper, R.C. Henderson, N. Bouwes, S.C. Mellison, J.L. Kershner. 2002. Testing common stream sampling methods: How useful are these techniques for broad-scale, long-term monitoring? General Technical Report, Ogden, Utah: U.S.D.A., Forest Service, Intermountain Research Station.

Roper, B.B., J.L. Kershner, E. Archer, R. Henderson, and N. Bouwes. 2002. An evaluation of physical stream habitat attributes used to monitor streams. Journal of the American Water Resources Association 38(6):1637-1646.

Budy, P., G.P. Thiede, N. Bouwes, C. Petrosky, and H. Schaller. 2002. Evidence linking delayed hydrosystem mortality of Snake River salmon to their earlier hydrosystem experience. North American Journal of Fisheries Management 22:35-51.

Crowl, T.A., N. Bouwes, M.J. Townsend, A.P. Covich, and F.N. Scatena. 2000. Estimating the potential role of freshwater shrimp on an aquatic insect assemblage in a tropical headwater stream: A bioenenergetics approach. Verhandlungen Internationale vereinigung fur Theoretische und Angewandte Limnologie 27(4) 2403-2407.
 
Bouwes, N., and C. Luecke. 1997. The fate of Bonneville cisco eggs in Bear Lake: evaluating mechanisms of egg loss. Transactions of the American Fisheries Society 126:240-247.

Crowl, T.A., C.R. Townsend, N. Bouwes, H. Thomas. 1997. Scale and causes of patchiness in stream invertebrate assemblages: top-down predator effects? Journal of the North American Benthological Society 16(1):277-285. 

Schindler, D.E., B.M. Johnson, N.A. MacKay, N. Bouwes, J.F. Kitchell. 1994. Crab: snail size-structured interactions and salt marsh predation gradients. Oecologia 97(1):49-61.
 
He, X., J.F. Kitchell, J.R. Hodgson, R. Wright, P.A. Soranno, D.M. Lodge, P.A. Cochran, D. Benkowski, and N. Bouwes. 1993. Roles of fish predation: piscivory and planktivory. In R. Carpenter and J. F. Kitchell (editors) The trophic cascade in lakes. Cambridge University Press. Great Britain.

Recent Reports

ISEMP/CHaMP. 2015. Combined Annual Report for the Integrated Status and Effectiveness Monitoring Program and Columbia Habitat Monitoring Program: 2014. Bonneville Power Administration., Bonneville Power Administration. 

CHaMP. 2015. The Columbia Habitat Monitoring Program: 2013 Third Year Lessons Learned Project Synthesis Report 2011-006-00., Bonneville Power Administration, Bonneville Power Administration. 

O'Brien G, Wheaton JM and Bouwes N. 2015. Synthesis & Recommendations from Middle Fork John Day River Styles - Leveraging the River Styles Framework in Tributary Habitat Management for the Columbia River Basin. Fluvial Habitats Center, Utah State University, Prepared for Eco Logical Research and Bonneville Power Administration, Logan, UT, 20 pp. DOI: 10.13140/2.1.3937.3129.

ISEMP. 2014. The Integrated Status and Effectiveness Monitoring Program: Annual Report for Fiscal Year 2013. . Bonneville Power Administration, Bonneville Power Administration.

ISEMP. 2013. The Integrated Status and Effectiveness Monitoring Program: Lessons Learned Synthesis Report 2012 Update. Bonneville Power Administration, Bonneville Power Administration.

Wheaton, J., S. Bennett, B. Bouwes, and R. Camp. 2012. Asotin Creek Intensively Monitored Watershed: Restoration plan for Charley Creek, North Fork Asotin, and South Fork Asotin Creeks. DRAFT: April 7, 2012. Prepared for the State of Washington Recreation and Conservation Office, Olympia, WA. Prepared by Eco Logical Research Ltd.

 

Bennett, S., R. Camp, B. Bouwes, and E. Wall. 2012. Southeast Washington Intensively Monitored Watershed Project in Asotin Creek: year 4 pretreatment monitoring summary report. Prepared for the State of Washington Recreation and Conservation Office, Olympia, WA. Prepared by Eco Logical Research Ltd. .

 

ISEMP. 2012. The Integrated Status and Effectiveness Monitoring Program: Lessons Learned Synthesis Report 2003‐2011. Prepared by ISEMP for the Bonneville Power Administration. Published by Bonneville Power Administration. 159 pp.

 

Ward, M.B., P. Nelle and S.M. Walker. (editors). 2011. CHaMP: 2011 Pilot Year Lessons Learned Project Synthesis Report. Prepared for the Bonneville Power Administration by CHaMP. Published by Bonneville Power Administration, Portland, OR. 95 pp.

 

Bouwes, N., J. Moberg, N. Weber, B. Bouwes, C. Beasley, S. Bennett, A.C. Hill, C.E. Jordan, R. Miller, P. Nelle, M. Polino, S. Rentmeester, B. Semmens, C. Volk, M.B. Ward, G. Wathen, and J. White. 2011. Scientific protocol for salmonid habitat surveys within the Columbia Habitat Monitoring Program. Prepared by the Integrated Status and Effectiveness Monitoring Program and published by Terraqua, Inc., Wauconda, WA.


Bouwes, N. 2010. The Integrated Status and Effectiveness Monitoring Program: John Day Basin Pilot Project, 2009. Prepared for the Bonneville Power Administration’s Integrated Status and Effectiveness Monitoring Program. 270 pp.

Bennett, S., N. Bouwes, E. Wall. 2010. Southeast Washington Intensively Monitored Watershed Project in Asotin Creek: Year Two Pretreatment Monitoring Annual Report. Prepared for State of Washington, Recreation and Conservation Office, Olympia, WA. 67pp.

Nelle, P., N. Bouwes, C. Beasley, M. B. Ward, J. Monahan. 2009. A strategy for implementing an Intensively Monitored Watershed program in the Entiat River subbasin. : Prepared for the Bonneville Power Administration’s Integrated Status and Effectiveness Monitoring Program. 82 pp.

Bennett, S. and N. Bouwes. 2009. Southeast Washington Intensively Monitored Watershed Project: Selection Process and Proposed Experimental and Monitoring Design for Asotin Creek. Prepared for: State of Washington, Recreation and Conservation Office Olympia, Washington.

Nelle, P., C. Beasley, N. Bouwes, C. E. Jordan, S. Rentmeester, C. J. Volk, M. B. Ward, J. White. 2009. Annual Report of the Integrated Status and Effectiveness Monitoring Program: Fiscal Year 2009.

Nelle, P., M. B. Ward, C. Beasley, N. Bouwes, C. E. Jordan, S. Rentmeester, C. Volk eds. 2008. A Review of the Integrated Status and Effectiveness Monitoring Program: Prepared for the Bonneville Power Administration’s Integrated Status and Effectiveness Monitoring Program. 238 pp.

Nelle, P., M. B. Ward, C. Beasley, N. Bouwes, C. E. Jordan, S. Rentmeester, C. Volk eds. 2007. A Review of the Integrated Status and Effectiveness Monitoring Program: Prepared for the Bonneville Power Administration’s Integrated Status and Effectiveness Monitoring Program. 238 pp.

Schaller, H., P. Wilson, S. Haeseker, C. Petrosky, E. Tinus, T. Dalton, R. Woodin, E. Weber, T. Berggren, J. McCann, S. Rassk, H. Franzoni, P. McHugh, N. Bouwes. 2007. Comparative Survival Study (CSS) of PIT-Tagged Spring/Summer Chinook and Steelhead of the Columbia River Basin: Ten-year Retrospective Analyses Report. Prepared for the Bonneville Power Administration.

Marmorek, D.R., M. Porter and D. Pickard (eds). 2006. Collaborative Systemwide Monitoring and Evaluation Project (CSMEP) – Year 3, Project No. 2003-036-00, Annual Report for FY 2006. Prepared by ESSA Technologies Ltd., Vancouver, B.C. on behalf of the Columbia Basin Fish and Wildlife Authority, Portland, OR. 126 pp. + appendices.

Pacific Northwest Aquatic Monitoring Partnership (PNAMP) & The Collaborative Systemwide Monitoring and Evaluation Project (CSMEP). 2006. Second Annual Research, Monitoring and Evaluation (RME) Workshop for Decision Makers, Program Managers, Scientists and Field Practitioners.

Nelle, P., M. B. Ward, C. Beasley, N. Bouwes, C. E. Jordan, S. Rentmeester, C. Volk eds. 2006. A Review of the Integrated Status and Effectiveness Monitoring Program: 2003 – 2006. Prepared for the Bonneville Power Administration’s Integrated Status and Effectiveness Monitoring Program. 238 pp.

Bouwes, N. ed. 2006. Integrated status and effectiveness monitoring John Day pilot program, 2005 annual report. Compiled and edited by Eco Logical Research, Inc. Providence, UT for NOAA Fisheries Service and the Bonneville Power Administration. 115 pp.
http://www.nwfsc.noaa.gov/research/divisions/cbd/mathbio/index.cfm
 

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