Software Guide helps you to locate the software you are looking for and have a feel of it by running sample jobs on HPC System.
- To get started, click on the link that applies to you under the Section "Compiler and Libraries" and "Applications" .
- The job scripts with PBS directives are used to submit jobs requesting for HPC resources.
- You are restricted by access policies for resources available to you.
- If you can not find your application listed, you may want to install it in your home directory. Follow the instructions at Guide to Installing Software in Home Directory. And if you are unable to install it, please contact us at .
Compilers and Libraries
*, GNU GSL
, BOOST, CULA
Distributed Memory Frameworks
Global Arrays (work in progress...)
* , PHENIX
, openmm Amber
, UCSF Chimera
, Parser, Gadgetron
, Bowtie2 & Samtools