I am a postdoctoral scholar in CU Boulder working on the development of new imaging modalities. I am particulary interested in ultrathin endoscopes and in imaging through tissue. During my PhD, I worked on super-resolution for fluorescence microscopy in the Fresnel institute (Marseille France).
I studied at Ecole Centrale de Nantes (ECN), where I obtained an engineer degree and a master degree in Automatics signal and image (master ARIA).
Research area: signal processing for microscopy
Research area: signal processing for microscopy
- Computational imaging
- Compressed sampling
- Convex optimization, Inverse problems
- Fourier optics simulation
- Blind Structured Illumination Microscopy (Blind-SIM)
Publications
Publications
Published papers:
Published papers:
- Wavefront shaping in complex media with a 350 KHz modulator via a 1D-to-2D transform. O Tzang, E Niv, S Singh, S Labouesse, G Myatt, R Piestun. Nature Photonics, 2019 (link)
- Hybrid photoacoustic-fluorescence microendoscopy through a multimode fiber using speckle illumination. A M Caravaca-Aguirre, S Singh, S Labouesse, M V Baratta, R Piestun, E Bossy. APL photonics, 2019 (link)
- Two-photon speckle illumination for super-resolution microscopy. A Negash, S Labouesse, P C Chaumet, K Belkebir, H Giovannini, M Allain, J Idier, A Sentenac. JOSA A, 2018 (link)
- A theoretical analysis of the super-resolution capacity of imagers using speckle illuminations. J Idier, S Labouesse, P Liu, M Allain, S Bourguignon, A Sentenac. IEEE Transactions on Computational Imaging , 2017 (link)
- Joint reconstruction strategy for structured illumination microscopy with unknown illuminations. S Labouesse, M Allain, J Idier, S Bourguignon, A Negash, P Liu, A Sentenac. IEEE Transactions on Image Processing, 2017 (link)
- Noise‐Corrected Principal Component Analysis of fluorescence lifetime imaging data. A Le Marois, S Labouesse, K Suhling, R Heintzmann. Journal of Biophotonics, 2016 (link)
- Improving the axial and lateral resolution of three-dimensional fluorescence microscopy using random speckle illuminations. A Negash, S Labouesse, N Sandeau, M Allain, H Giovannini, J Idier, R Heintzmann, P Chaumet, K Belkebir, A Sentenac. JOSA A, 2016 (link)
Submitted paper:
Submitted paper:
Conferences:
Conferences:
- 1D to 2D modulation for ultra fast focusing through complex media. O Tzang, S Labouesse, S Singh, E Niv, G Myatt, R Piestun, Computational Optical Sensing and Imaging, JTh3D. 1, 2019
- Random Speckle Illumination Patterns for Compressed Imaging Through a Multimode Fiber. S Labouesse, Sakshi Singh, Rafael Piestun, EOS Waves in Complex Photonics Media, Anacapri, 2018
- Fast reconstruction in blind fluorescence structured illumination microscopy. S Labouesse, A Negash, J Idier, S Bourguignon, T Mangeat, P Liu, A Sentenac, M Allain. Mathematics in Imaging, 2017
- Speckle blind SIM with calibration targets. S Labouesse, T Mangeat, A Negash, J Idier, S Bourguignon, P Liu, A Sentenac, M Allain. Focus on Microscopy (FOM) International Conference, 2017
- Fluorescence blind structured illumination microscopy: a new reconstruction strategy. S Labouesse, M Allain, J Idier, S Bourguignon, A Negash, P Liu, A Sentenac. Image Processing (ICIP), 2016 IEEE International Conference on, 3166-317, 2016
- Super-resolution capacity of imagers using random illuminations. S Labouesse, J Idier, P Liu, M Allain, S Bourguignon, and A Sentenac. Mathematics in Imaging, MTh1H. 5, 2016
- Blind fluorescence structured illumination microscopy: A new reconstruction strategy. S. Labouesse, M. Allain, J. Idier, S. Bourguignon, P. Liu et A. Sentenac. Actes du 25e colloque GRETSI, Lyon, 2015
Teaching
Teaching
2018-2019:
2018-2019:
- Blind-SIM for PhD students, 1h15
- Compressed sampling for PhD students, 1h15
2016-2017:
2016-2017:
- C programming language for bachelor's Degree, 34h
- Acquisition, signal and image processing for master's degree, 30h
2014-2016:
2014-2016:
- C programming language for bachelor's Degree, 130h
Talks
Talks
- Computational Optical Sensing and Imaging, (OSA International conference), Munich Allemagne, 2019
- Topical Meeting on Waves in Complex Photonics Media, EOS, Anacapri Italy, 2018
- Mathematics in Imaging (OSA International conference), San Francisco USA, 2017
- Signal and Image Processing for Biology, Paris Descartes university France, 2016
- Mathematics in Imaging (OSA International conference), Heidelberg Allemagne, 2016
- JIONC (days of unconventional optical imaging), ESPCI Paris, France, 2016
- Waves and Imaging in random media, IHP Paris France, 2015
- GRETSI, ENS Lyon France, 2015
- JIONC (days of unconventional optical imaging), ESPCI Paris France, 2015
Posters
Posters
- Computational Optical Microscopy, Prague Czech Republic, 2019
- Image Science (Gordon international conference), Boston USA, 2018
- OIP'21 (Optics for information processing in the 21th century), Florence Italy, 2018
- FOM (International Conference, Focus On Microscopy), Bordeaux France, 2017
- ICIP (IEEE International Conference on Image Processing), Phoenix USA, 2016
- Inphyniti (Physical Interfaces, Digital and Theoretical), IHP Paris France, 2016
- BCP (Biologists, Chimists and Physicist), Fresnel Institute Marseille France, 2015