Web Application Development

Web App: https://dorssaa.it.helsinki.fi 

Planning to submit to Nucleic Acids Research

BioRxiv: https://www.biorxiv.org/content/10.1101/2023.12.29.573639v1

Web App: https://dorssaa.it.helsinki.fi 

NIMAA provides functions for constructing weighted and unweighted bipartite networks , analysing the similarity of labels in nominal variables, clustering labels or categories to super-labels , validating clustering results, predicting bipartite edges by missing weight imputation, validating edge predictions , and providing a variety of visualization tools. 

BioRxiv: www.biorxiv.org

Web App: https://dorssaa.it.helsinki.fi 

This dashboard explores data from the landmark study: Quantitative Proteomics of the Cancer Cell Line Encyclopedia . The CCLE proteomics project used mass spectrometry (TMT) across 375 cell lines from diverse tissues to identify pathway-level protein organization, epithelial-mesenchymal transitions, and mutation-specific changes. The project reveals that protein-level organization often cannot be inferred from RNA, emphasizing the value of proteomics.