Publications (Google Scholar)

• Taming Irregular Applications via Advanced Dynamic Parallelism on GPUs, Jing Zhang, Ashwin M. Aji, Michael L. Chu, Hao Wang, and Wu-chun Feng, Proceedings of the 15th ACM International Conference on Computing Frontiers (CF), Ischia, Italy, May 2018
• cuBLASTP: Fine-Grained Parallelization of Protein Sequence Search on CPU+GPU, Jing Zhang, Hao Wang, and Wu-chun Feng, IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), Volume: 14, Issue: 4, July-Aug. 2017
• PaPar: A Parallel Data Partitioning Framework for Big Data Applications, Hao Wang, Jing Zhang, Da Zhang, Sarunya Pumma, and Wu-chun Feng, Proceedings of the 31th IEEE International Parallel and Distributed Processing Symposium (IPDPS), Orlando, FL, USA, May 2017
• Eliminating Irregularities of Protein Sequence Search on Multicore Architectures, Jing Zhang, Sanchit Misra, Hao Wang, and Wu-chun Feng, Proceedings of the 31th IEEE International Parallel and Distributed Processing Symposium (IPDPS), Orlando, FL, USA, May 2017
• muBLASTP: Database-Indexed Protein Sequence Search on Multicore CPUs, Jing Zhang, Sanchit Misra, Hao Wang, and Wu-chun Feng, BMC Bioinformatics (Journal), Volume: 17, Page: 443, 2016
• Fast Detection of Transformed Data Leaks, Xiaokui Shu, Jing Zhang, Danfeng Yao, and Wu-chun Feng, IEEE Transactions on Information Forensics and Security (TIFS), Volume: 11, Issue: 3, March 2016
• Rapid and Parallel Content Screening for Detecting Transformed Data Exposure, Xiaokui Shu, Jing Zhang, Danfeng Yao, and Wu-chun Feng, Proceedings of the 3rd International Workshop on Security and Privacy in Big Data (BigSecurity), Hong Kong, China, April 2015
• pDindel: Accelerating indel detection on a multicore CPU architecture with SIMD, Da Zhang, Hao Wang, Kaixi Hou, Jing Zhang, and Wu-chun Feng, Proceeding of the 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), Miami, FL, USA, October 2015
• Rapid Screening of Transformed Data Leaks with Efficient Algorithms and Parallel Computing, Xiaokui Shu, Jing Zhang, Danfeng Yao, and Wu-chun Feng, Proceedings of 5th ACM Conference on Data and Application Security and Privacy (CODASPY), San Antonio, TX, March 2015 (Best Poster Award)
• Aeromancer: A Workflow Manager for Large-Scale MapReduce-Based Scientific Workflows, Nabeel Mohamed, Nabanita Maji, Jing Zhang, Nataliya Timoshevskaya, and Wu-chun Feng, Proceedings of 13th IEEE International Conference on Trust, Security and Privacy in Computing and Communications (TrustCom), Beijing, China, September 2014
• cuBLASTP: Fine-Grained Parallelization of Protein Sequence Search on a GPU, Jing Zhang, Hao Wang, Heshan Lin, and Wu-chun Feng, Proceedings of 28th IEEE International Parallel and Distributed Processing Symposium (IPDPS), Phoenix, AZ, May 2014
• Consolidating Applications for Energy Effciency in Heterogeneous Computing Systems, Jing Zhang, Hao Wang, Heshan Lin, and Wu-chun Feng, Proceedings of 15th IEEE International Conference on High Performance Computing and Communications (HPCC), Zhangjiajie, China, November 2013
• Optimizing Burrows-Wheeler Transform-Based Sequence Alignment on Multicore Architectures, Jing Zhang, Heshan Lin, Pavan Balaji, and Wu-chun Feng, Proceedings of 13th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid), Delft, Netherlands, May 2013
• OpenCL and the 13 Dwarfs: A Work In Progress, Wu-chun Feng, Heshan Lin, Tom Scogland, and Jing Zhang, Proceedings of 3rd ACM/SPEC International Conference on Performance Engineering (ICPE), Boston, MA, April 2012

Research Interests

• High Performance Computing
• Bioinformatics
• Emerging Parallel Architectures

Service

• Program Committee Member: ICPP'18, BPOD'18, Euro-Par'19, DSS'19
• Peer Review and Referee (Journals): TPDS, TCBB, JPDC, BMC, PARCO, IJDSN, FGCS
• Peer Review and Referee (Conferences): ICS'18, ICPP'18, ICPP'17, HPCC'17, BPOD'18, AsHES'18

Contact

• Email: zhangjing14 at gmail dot com