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Publications

Articles
2011
  • Djilas M, Olès C, Lorach H, Bendali A, Degardin J, Dubus E, Lissorgues-Bazin G, Rousseau L, Benosman R, Ieng S-H, Joucla S, Yvert B, Bergonzo P, Sahel J, Picaud S.
  • Three-dimensional electrode arrays for retinal prostheses: Modeling, geometry optimization, and experimental validation.
  • J Neural Eng. 8(4):046020. abstract

  • Yvert B, Mazzocco C, Joucla S, Langla A, Meyrand P.
  • aCSF motion ensures rhythmic activity in the developing CNS ex vivo: A mechanical source of rhythmogenesis?
  • J Neurosci. 31(24):8832-8840. abstract

  • Abdoun O, Joucla S, Mazzocco C, Yvert B.
  • NeuroMap: A spline-based interactive open-source software for spatiotemporal mapping of 2D and 3D MEA data.
  • Front Neuroinformatics 2011 Jan 31; 4:119. abstract open access on Frontiers in Neuroinformatics
2010
  • Charvet G, Rousseau L, Billoint O, Gharbi S, Rostaing JP, Joucla S, Trevisiol M, Bourgerette A, Chauvet P, Moulin C, Goy F, Mercier B, Colin M, Spirkovitch S, Fanet H, Meyrand P, Guillemaud R, Yvert B.
  • BioMEA: a versatile high-density 3D microelectrode array system using integrated electronics.
  • Biosens Bioelectron 25(8):1889-96. abstract

  • Joucla S, Pippow A, Kloppenburg P and Pouzat C.
  • Quantitative estimation of calcium dynamics from ratiometric measurements: A direct, non-ratioing, method.
  • J Neurophysiol 103(2):1130-44. abstract
2009
  • Rousseau L, Joucla S, Lissorgues G and Yvert B.
  • Microfabrication of new microelectrode arrays equipped with a ground surface configuration for focal neural microstimulation.
  • J Micromech Microeng, 19 – 074010, doi:10.1088/0960-1317/19/7/074010. abstract

  • Joucla S and Yvert B.
  • The “mirror” estimate: An intuitive predictor of membrane polarization during extracellular stimulation.
  • Biophys J 96(9):3495-3508. abstract

  • Joucla S and Yvert B.
  • Improved focalization of electrical microstimulation using microelectrode arrays: a modeling study.
  • PLoS ONE 4(3): e4828. doi:10.1371/journal.pone.0004828. abstract open access on PLoS ONE
2008
  • Moulin C, Gliere A, Barbier D, Joucla S, Yvert B, Mailley P, Guillemaud R.
  • A new 3-D finite-element model based on thin-film approximation for microelectrode array recording of extracellular action potential.
  • IEEE Trans Biomed Eng 55:683-692. abstract


Patent
2007
  • Joucla S, Rousseau L, Yvert B.
  • Dispositif de stimulation d’un tissu vivant par microélectrodes, ses modules amovible et utilisation.
  • Patent No 2.922.460
  • Deposited October 22, 2007
  • Published April 24, 2009 abstract


Software

2010
  • Abdoun O, Joucla S, Yvert B.
  • NeuroMap: Interactive Mapping of MEA Data.
  • Matlab GUI/package available under GPL licence on a dedicated website.
2009
  • Joucla S, Pouzat C.
  • CalciOMatic: Automatic Calcium Imaging Analysis.
  • R package available under GPL licence on the CRAN deposit website


Oral presentation in meeting

2009
  • Joucla S, Pippow A, Kloppenburg P, Pouzat C.
  • The CalciOMatic package: A new tool for quantitative calcium imaging analysis.
  • useR! The R User Conference, 2009 July 8-10, Rennes, France. site web abstract diaporama


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