1.    Nirmalya Bandyopadhyay, Manas Somaiya, Tamer Kahveci, Sanjay Ranka Analyzing Differential Gene Regulation in Two Group Perturbation Experiments, BMC Genomics, to appear.

2.    Arslan Munir, Sanjay Ranka, Ann Gordon-Ross, "High-Performance Energy-Efficient Multi-Core Embedded Computing," IEEE Transactions on Parallel and Distributed Systems, to appear.

3.    Yan Li, Sanjay Ranka, Sartaj Sahni: In-advance path reservation for file transfers in e-science applications. The Journal of Supercomputing, Vol. 59(3): 1167-1187, 2012.

4.    Weixun Wang, Sanjay Ranka and Prabhat Mishra, Energy-Aware Dynamic Reconfiguration Algorithms for Real-Time Multitasking Systems, Accepted to appear in Elsevier Sustainable Computing: Informatics and Systems (SUSCOM), 2011, Volume 1, pages 35-45.

5.    Bin Song, Esra Buyuktahtakin, Tamer Kahveci and Sanjay Ranka, Manipulating the steady state of metabolic pathways, IEEE/ACM Transactions on Computational Biology and Bioinformatics, Volume 8, pp. 732-747, 2011

6.    Jaeyeon Kang and Sanjay Ranka, Slack allocation algorithms for parallel machines. Journal of Parallel and Distributed Computing, Vol. 70(1), pp. 23-24, 2010.

7.    Parbati K. Manna, Shigang Chen, Sanjay Ranka: Inside the Permutation-Scanning Worms: Propagation Modeling and Analysis. IEEE/ACM Transaction Networks 18(3): 858-870 (2010).

8.    Eun-Sung Jung, Sanjay Ranka, Sartaj Sahni: Topology Aggregation for e-Science Networks. International Journal of Next-General Computing, volume 1, 2010, pp 1- .

9.    Nirmalya Bandyopadhyay, Tamer Kahveci, Sanjay Ranka, Yijun Sun and Steve Goodison, Pathway based Feature Selection Algorithm for Cancer Microarray Data" Advances in Bioinformatics, Volume 2009, Article ID 532989, 16 pages.

10.  Bin Song, Padmavati Sridhar, Tamer Kahveci and Sanjay Ranka, Double Iterative Optimization for Metabolic Network-Based Drug Target Identification, International Journal of Data Mining and Bioinformatics, 3:2, pages 124-144, 2009.

11.  Laukik Chitnis, Alin Dobra and Sanjay Ranka. Analyzing the techniques that improve fault tolerance of aggregation trees in sensor networks. Journal of Parallel and Distributed Computing, Vol. 69 (12), pp. 950-960, 2009.

12.  Jun Liu, Nirmalya Bandyopadhyay, Sanjay Ranka, Michael Baudis, Tamer Kahveci. Inferring Progression Models for CGH data, Journal of Bioinformatics, Vol. 25:17, pp. 2208-2215, 2009.

13.  Kannan Rajah, Sanjay Ranka, Ye Xia, Advance Reservation and Scheduling for Bulk Transfers in Research Networks, IEEE Transactions on Parallel and Distributed Systems, Vol. 20(11), pp. 1682-1697, 2009.

14.  Laukik Chitnis, Alin Dobra, and Sanjay Ranka, Fault tolerant aggregation in heterogeneous sensor networks. Journal of Parallel and Distributed Computing. Vol 69(2): 210-219 (2009).

15.  Kannan Rajah, Sanjay Ranka and Ye Xia, Scheduling Bulk File Transfer with Start and End Times, Scheduling Bulk File Transfers with Start and End  Times, Computer Networks, Vol 52(5), April 2008, pp. 1105-1122.

16.  Laukik Chitnis, Alin Dobra and Sanjay Ranka. Aggregation Methods for Large Scale Sensor Networks. ACM Transactions on Sensor Networks, Volume 4 ,  Issue 2, pp. 1-36,  March 2008.

17.  Manas Somaiya, Chris Jermaine and Sanjay Ranka, Learning Correlations Using the Mixture-Of-Subsets Model. ACM Transactions on Knowledge Discovery from Data, Volume 1, Number 4, 2008, pp 1-42.

18.  Srijit Kamath, Sartaj Sahni, Sanjay Ranka, Jonathan Li, and Jatinder Palta. Generalized field-splitting algorithms for optimal IMRT delivery efficiency, Physics in Medicine and Biology, 52, 2007, 5483-5496  (nominated for the 2008 Robbins Prize, given to the best paper in the journal of Physics in Medicine and Biology).

19.  Jun Liu, Sanjay Ranka, and Tamer Kahveci, Markers improve clustering of CGH data, Bioinformatics, Vol. 23(4) pp. 450-457, 2007.

20.  Xiuyao Song, Mingxi Wu, Christopher Jermaine, Sanjay Ranka. Conditional Anomaly Detection, IEEE Transactions on Data and Knowledge Engineering, Volume 19 (5) ,  pp.631-645, May 2007. 

21.  Jun Liu, Jaaved Mohammed, James Carter, Sanjay Ranka, Tamer Kahveci,  and Michael Baudis, Distance-based clustering of CGH data. Bioinformatics, 22(16):1971–1978, 2006.

22.  Shigang Chen and Sanjay Ranka, Detecting Internet Worms at Early Stage, invited paper (peer reviewed), IEEE Journal on Selected Areas in Communications, Special Issue on Recent Advances in Managing Enterprise Network Services, Vol. 23(10), pp. 2003-2012, 2005.

23.  Srijit Kamath, Sartaj Sahni, Jatinder Palta, and Sanjay Ranka, Algorithms for optimal sequencing of dynamic multileaf collimators, Physics in Medicine and Biology, 49, 1, pp.  33-54, 2004.

24.  Srijit Kamath, Sartaj Sahni, Jatinder Palta, Sanjay Ranka, and Jonathan Li, Optimal leaf sequencing with elimination of tongue-and-groove underdosage, Physics in Medicine and Biology, 49, 3, 2004, N7-N19.

25.  Srijit Kamath, Sartaj Sahni, Sanjay Ranka,  Jonathan Li, and Jatinder Palta, A comparison of step-and-shoot leaf sequencing algorithms that eliminate tongue-and-groove effect, Physics in Medicine and Biology, 49, 2004, 3137-3143.

26.  Srijit Kamath, Sartaj Sahni, Sanjay Ranka, Jonathan Li, and Jatinder Palta, Optimal field splitting for large intensity-modulated fields, Medical Physics, 31, 12, 2004, 3314-3323.

27.  Srijit Kamath, Sartaj Sahni, Jonathan Li, Jatinder Palta, and Sanjay Ranka, Leaf sequencing algorithms for segmented multileaf collimation, Physics in Medicine and Biology, 48, 3, 2003, 307-324.

28.  Vipin Kumar, Sanjay Ranka, Vineet Singh: Guest Editors' Introduction: Special Issue on High-Performance Data Mining. J. Parallel Distrib. Comput. 61(3): 281-284 (2001).

29.  Z. Li, I Nalcacioglu, S. Ranka, S. Sahni, J. Palta, W. Tome, and S. Kim, An algorithm for automatic, CT-based source localization after prostate implant, Medical Physics, 28(7), 2001, 1410-1415.

30.  S. Su, S. Ranka and X. He, Performance Analysis of Parallel Query Processing Algorithms for Object-Oriented Databases.  IEEE Transactions on Knowledge and Data Engineering, November 2000, pp. 979-997.

31.  I. Al-furaih, S. Aluru and S. Ranka: Parallel Construction of Multidimensional Binary Search Trees, IEEE Transactions on Parallel and Distributed Systems, February 2000, pp. 136-148.

32.  I. Al-furaih, S. Aluru and S. Ranka, Practical Algorithms for Selection on Coarse Grain Parallel Computers, IEEE Transactions on Parallel and Distributed Systems, August 1997, pp. 803-810.

33.  C. W. Ou and S. Ranka, Parallel Incremental Graph Partitioning, IEEE Transactions on Parallel and Distributed Systems, August 1997, pp. 884-896.

34.  R. V. Shankar and S. Ranka. Random Data Accesses on a Coarse-grained Parallel Machine I. One-to-one Mappings, Journal of Parallel and Distributed Computing, July 1997, pp. 14-23.

35.  R. V. Shankar and S. Ranka. Random Data Accesses on a Coarse-grained Parallel Machine II. One-to-many and Many-to-one Mappings, Journal of Parallel and Distributed Computing, July 1997, pp. 24-34.

36.  M. Kaddoura and S. Ranka. Runtime Support for Parallelization  of Data-Parallel Applications on Adaptive and Nonuniform Environments, Journal of Parallel and Distributed Computing (Special Issue on Workstation Clusters and Network-based Computing), June 1997, pp. 163-168.

37.  C. W. Ou and S. Ranka. Parallel Remapping Algorithms for Adaptive Problems, Journal of Parallel and Distributed Computing, May 1997, pp. 1010-108.

38.  S. Bae and S. Ranka.  A Comparison of Different Message-Passing Paradigms for the Parallelization of Two Irregular Applications, The Journal of Supercomputing, 1996, vol. 10, pp. 55-85.

39.  C. W. Ou, S. Ranka, and G. Fox.  Fast and  Parallel Mapping Algorithms for Irregular Problems, Journal of Supercomputing, October 1996, Vol. 10, No. 2, pp. 119-140.

40.  M. Kaddoura, S. Ranka and A. Wang.  Array Decompositions for Non-uniform Computational Environment, Journal of Parallel and Distributed Computing,  August 1996, pp. 91-105.

41.  A. Menon, K. Mehrotra, C. Mohan and S. Ranka. Characterization of a class of Sigmoid Functions with applications to Neural Networks,  Neural Networks, 1996, Vol. 9, No. 5, pp. 819-835.

42.  K. Dincer, Z. Bozkus, S. Ranka, and G. Fox. Benchmarking the computation and communication performance of the CM-5, Concurrency: Practice and Experience, Jan-Feb 1996, vol. 8(1), pp. 47-69.

43.  J. C. Wang, T. H. Lin, and S. Ranka. Distributed Scheduling of Unstructured Collective Communication on the CM-5,  Parallel Processing Letters (Special Issue on Partitioning and Scheduling), December 1995, pp. 647-658.

44.  S. Ranka, J. C. Wang and M. Kumar.  Irregular Personalized Communication on Distributed Memory Machines, Journal of Parallel and Distributed Computing, 25 (1995), pp. 58-71.

45.  R. Anand, K. G. Mehrotra, C. K. Mohan, and S. Ranka.  Efficient Classification for Multiclass Problems Using Modular Neural Networks,   IEEE Transactions on Neural Networks, January 1995, vol. 6.,  pp.  117-124.

46.  H. S. Maini,  K.G. Mehrotra, C. K. Mohan, and S. Ranka. Knowledge-based non-uniform crossover, Journal of Complex Systems, 8 (1994), pp. 257-293.

47.  D. D. Ganguly, C. K. Mohan, and S. Ranka.  A Space and Time Efficient Algorithm for Lattice Encoding, IEEE Trans. on Knowledge Engineering,  October 1994, vol. 6, pp. 819-829.

48.  S. Ranka,  J. C. Wang, and G. C. Fox.  Static and Runtime Scheduling of All-to-Many  Personalized Communication on Permutation Networks,  IEEE Transactions on Parallel and Distributed Systems, December 1994, vol. 5, No. 12, pp. 1266-1274.

49.  H. Maini, K. G. Mehrotra, C. K. Mohan, and S. Ranka. Genetic Algorithms for Soft Decision Decoding of Linear Block Codes, Journal of Evolutionary Computation, 1994, vol. 2, No. 2, pp. 145-164.

50.  A. N. Choudhary, G. C. Fox, S. Hiranandani, K. Kennedy, C. Koelbel, S. Ranka, and C-W. Tseng.    Unified Compilation of Fortran 77D and 90D,  ACM Letters on Programming Languages and Systems, March--December 1993,  2(1-4), pp. 95-114.

51.  N. Copty,  S. Ranka, G. C. Fox, and R. Shankar.  Data Parallel Algorithms for the Region Growing Algorithms on the CM-5,  Journal of  Parallel and Distributed Computing, April 1994, pp. 160-167.

52.  Z. Bozkus, A. Choudhary, G. Fox, T. Haupt, and S. Ranka.  Compiling Fortran 90D/HPF for Distributed Memory MIMD Computers, Journal of Parallel and Distributed computing,  April 1994, pp. 15-26. 

53.  I. Ahmad, A. Ghafoor, K. G. Mehrotra, C. K. Mohan, and S. Ranka. Applying Neural Networks to Performance Evaluation of Dynamic Load Balancing Algorithms, Concurrency: Practice and Experience,  August 1994, vol. 6, No. 5, pp. 393-409.

54.  R. Anand, K. G. Mehrotra, C. K. Mohan, and S. Ranka.  An Improved Algorithm for Neural Network Classification of Imbalanced Training Sets, IEEE Transactions on Neural Networks, November 1993, vol. 4, No. 6, pp. 962-969.

55.  R. Anand, K. G. Mehrotra, C. K. Mohan, and S. Ranka.  Analyzing Images Containing Multiple Sparse Patterns with Neural Networks, Journal of Pattern Recognition, November 1993, vol. 26, No. 11, pp. 1717--1724.

56.  R. Shankar and S. Ranka.  Parallel Vision Algorithms Using Sparse Array Representations,  Journal of Pattern Recognition, 1993, vol. 26, No. 10, pp. 1511--1519.

57.  S. Ranka, J. C. Wang, and  N. Yeh.  Embedding Meshes on the Star Graph, Journal of Parallel  and Distributed Computing,  October 1993, vol. 19, No. 2, pp. 131--135.

58.  A. Choudhary,  G. Fox, S. Hiranandani, K. Kennedy, C. Koelbel,   S. Ranka,  and J. Saltz.  Software Support for Irregular and Loosely Synchronous Problems, Computing Systems in Engineering,  vol. 3, Nos 1-4, 1992, pp. 43--52.

59.  T. Heywood and S. Ranka. A Practical Hierarchical Model of Parallel Computation: The Model, Journal of Parallel and Distributed Computing,   November 1992, vol. 3, pp. 212--232.

60.  T. Heywood and S. Ranka.  A Practical Hierarchical Model of Parallel Computation: Binary Tree and FFT Graph Algorithms, Journal of Parallel  and Distributed Computing, November 1992, vol. 3, pp. 233--249.

61.  K. Chakraborty, C. K. Mohan, K. G.  Mehrotra, and S. Ranka.  Forecasting the Behavior of Multivariate Time Series Analysis Using Neural Networks,  Neural Networks, 1992,  vol. 5, pp. 961--970.

62.  A. N. Choudhary and S. Ranka. Mesh and Pyramid Algorithms for Iconic Indexing, Journal of Pattern Recognition, 1992, vol. 25, No. 9, pp. 1061--1067.

63.  R. V. Shankar and S. Ranka. Hypercube Algorithms for Operations on Quadtrees, Journal of Pattern  Recognition, 1992, vol. 25, No. 7, pp. 741--747.    K. Ashutosh, H. Lee, K. G. Mehrotra, C. K. Mohan, and S. Ranka. Prediction Criteria for Successful Weaning from Respiratory Support: Statistical and Connectionist Analyses, Critical Care, September 1992, vol 20, No. 9, pp. 1295--1301.

64.  Y. C. Chung and S. Ranka.  Mapping Finite Element Meshes on Hypercubes, Journal of Supercomputing, 1992, vol. 6, pp. 257--282.

65.  K. G. Mehrotra, C. K. Mohan, and S. Ranka.   Bounds on the Number of Samples Needed for Neural Learning, IEEE Transactions on Neural Networks,  November 1991, vol. 2, No. 6, pp. 548--558.  

66.  S. Ranka and S. Sahni.   Efficient Serial and Parallel Algorithms for Median Filtering, IEEE Transactions on  Acoustics, Speech and Signal Processing,  June 1991, vol. 39, No. 8, pp. 1462--1466.

67.  S. Ranka and S. Sahni.   Clustering on  a Hypercube Multicomputer, IEEE Transactions on Parallel  and Distributed Systems, April 1991, vol. 2, No. 4, pp. 129--137.

68.  S. Ranka and T. Heywood.  Two-dimensional Pattern Matching with k Mismatches, Journal of Pattern Recognition, January 1991, vol. 24,  No. 1, pp. 31--40. 

69.  S. Ranka and S. Sahni.  Image Template Matching on MIMD Hypercube Multicomputers, Journal of Parallel and Distributed Computing,  September 1990, vol. 10, No. 1, pp. 79--84.

70.  S. Ranka and S. Sahni.   String Editing on a Hypercube Multicomputer, Journal of Parallel and Distributed Computing, 1990,  vol. 9,  pp. 411--418. 

71.  S. Ranka and S. Sahni.  Convolution on  an SIMD Mesh Connected Multicomputer, IEEE Transactions on Pattern Analysis and Machine Intelligence, March 1990, vol. 12, No. 3, pp. 315--318.

72.  S. Ranka and S. Sahni.  Computing Hough Transform on  Hypercube Multicomputers, The Journal of Supercomputing, vol. 4, 1990, pp. 169--190.

73.  S. Ranka and S. Sahni.  Odd-Even Shifts on SIMD Hypercubes, IEEE Transactions on Parallel and Distributed Systems, January 1990, vol. 1, No. 1, pp. 77--82.

74.  M. Kaddoura, C. W. Ou, and S. Ranka. Mapping Unstructured Computational Graphs for Adaptive and Non-Uniform Computational Environments, IEEE Parallel and Distributed Technology Magazine, Fall 95, vol. 3, pp. 63-69.

75.  A.Choudhary and S. Ranka.  Parallel Processing for Computer Vision and Image Understanding, Guest Editor's Introduction, IEEE Computer Magazine, February 1992, vol. 25, No. 2, pp.  7--10.

76.  S. Ranka, Y. Won, and S. Sahni. Programming a Hypercube Multicomputer, IEEE Software Magazine, September 1988, pp. 69--77.