Nigel H. Collier

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PASBio

(21st Feb. 2010) Please note: this part of the site is still under construction as I am migrating content from older Web pages.  The PASBIO project ran from 2002 until 2005

About

The PASBIO project has the objective to analysis predicate-argument structures from natural language usage in biological and biomedical lituratures. Samples of sentences are mostly from Medline and Embo, however for common agreement purpose some sentences are sampled from PNAS, NAR, and JV as well.

Predicate Structures

Resources

To download XML files, click here.  

This XML files contains predicate-argument structure frames and sentence examples related to the structures.

Publications

  • Tuangthong Wattarujeekrit, Parantu Shah and Nigel Collier (2004), "PASBio: predicate-argument structures for event extraction in molecular biology", in BMC BioInformatics, 5:155.

  • Tuangthong Wattarujeekrit and Nigel Collier (2005), “Exploring Predicate-Argument Relations for Named Entity Recognition in the Molecular Biology Domain”, Springer-Verlag Lecture Notes in Computer Science, vol. 3735, ISBN 3-540-29230-6, pp. 267-280. [html][PASBio data]

Members

  1. Tuangthong WATTARUJEEKRIT
  2. Parantu SHAH
  3. Nigel COLLIER
Subpages (1): All predicates