gmonce_doc

articulos_fase_uno

[Aprendizaje automático]

Data Mining (Practical Machine Learning Tools and Techniques) Second Edition. I.Witten, E.Frank [2005]

Machine Learning T.Mitchell [1997]

Cap 6: Hidden markov and Maximum Entropy Models, D. Jurafsky, J. Martin [2007] [PDF]

Conditional Random Fields: Probabilistic Models for Segmenting and Labeling Sequence Data J.Lafferty, A. McCallum, F.Pereira [2001] [PDF]

 

[Information Extraction]

Computational Text Analysis: For Functional Genomics and Bioinformatics S. Raychaudhuri [2006]

Extraction of Protein Interaction Data: A Comparative Analysis of Methods in Use H. Jose, T. Vadivukarasi, J.Devakumar [2008] [PDF]

Banner: an executable survey of advances in biomedical NER R.Leaman, G.Gonzalez [2008] [PDF]

Fitting the finite-state automata platform for mining gene functions from biological scientific literature, I.Jilani, N.Grabar, M.C.Jaulent [2006] [PDF]

Biomedical Named Entity Recognition Using Conditional Random Fields and Rich Feature Sets B.Settles [2004] [PDF]

 

[Programación]

An open-source framework for large-scale, flexible evaluation of biomedical  text mining systems W. Bamugartner Jr. [2008] [PDF]

Python Tutorial G. van Rossum [2008][PDF]

Dive into Python M.Pilgrim [2004][PDF]

Natural Language Processing in Python S. Bird, E.Klein, E.Loper [2007] [PDF]


[Anotación de Corpus y Ontologías]

Corpus annotation for mining biomedical events from literature, J.Kim, T.Ohta, J.Tsujii [2008]

New directions in biomedical text annotation: definitions, guidelines and corpus construction W John Wilbur [2006] [PDF]

Corpus design for biomedical natural language processing K. Bretonnel Cohen et al. [2005] [PDF]

GO, Annotation fonctionelle, N.Grabar, P.Ruch [2006] [PDF]

Ontology-Based MEDLINE Document Classification F.Camous, S.Blott, A. Smeaton [2005] [PDF]

Ontology-based knowledge representation for bioinformatics R.Stevens, C. Gable, S.Bechhofer [2000] [PDF]