CRANKITE

A Fast and Easy Polypeptide Backbone Conformation Sampler

CRANKITE is a suite of programs for simulating backbone conformations of polypeptides and proteins. The core of the suite is an efficient Metropolis Monte Carlo sampler of backbone conformations in atomic details (see animation). In contrast to other programs relying on local Metropolis moves in the space of dihedral angles, the sampler utilizes local crankshaft rotations of rigid peptide bonds in Cartesian space. The sampler allows fast simulation and analysis conformational changes and secondary structure for protein of average length. The software is licensed under GPL v2.

Old version crankite-16.tar.gz (MD5 52b3b8e766bcb5500d920b6cb297396e)

Updated version crankite-20.tar.gz (MD5 34289539f78df23bc7a956cbbbf42a84)