Software

Primer X (Mutagenesis Primers) 

PHYRE (Protein Fold Recognition Server)

ExPASy (Bioinformatics Resource Portal)

ModLoop (Modeling of Loops in Protein Structures)

BioLabs 

Calculations (Three-/One-letter Amino Acids)

tcoffee (Multiple Sequence Alignment Tool)

CLUSTALW (Multiple Sequence Alignment) 

BLAST

BioEdit (Biological Sequence Alignment Editor) 

NMR

Tutorial-1 (Protein NMR)

CARA (Computer Aided Resonance Assignment)

NMRPipe (Link1, )

CCPN (Collaborative Computing Project for NMR)

Sparky (NMR Assignment and Integration Software)

NMRViewJ (Visualization and Analysis of NMR data)

BMRB (Biological Magnetic Resonance Data Bank)

NESG Wiki

PDB

DeepView - Swiss - PDBViewer

DS Visualizer 

PyMOL (Molecular Visualization System)

MolScript (Displaying Molecular 3-D Structures)

MolMol (Molecular Graphics Program)

        Tutorial -1 

RasMol (Molecular Graphics Program)

VMD (Molecular Visualization Program)

Chemistry Drawing Software

Accelrys Draw

ACD/Chem Sketch

Search Engine

PubMed, SciFinder, ISI Web of Science, Scopus, Google Scholar, Chemdex, 

News

TheScientist, F1000, C&EN, 

Groups

De Novo Design

Protein Folding

Miscellaneous 

Bio-Soft