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Selected Publications

  1. Saritha Namboodiri, Chandra Verma, Pawan K. Dhar, Alessandro Giuliani and Achuthsankar S. Nair
    Application of Recurrence Quantification Analysis (RQA) in Biosequence Pattern Recognition
    ACC2011 Springer Proceedings, June 2011

  2. Geetha Govindan and Achuthsankar S. Nair
    New Feature Vector for Apoptosis Protein Subcellular Localization Prediction
    ACC2011 Springer Proceedings, June 2011

  3. Vrinda V. Nair, Anita Mallya, Bhavya Sebastian, Indu Elizabeth and Achuthsankar S. Nair
    Hurst CGR (HCGR) – A Novel Feature Extraction Method from Chaos Game Representation of Genomes
    ACC2011 Springer Proceedings, June 2011

  4. G. Gopakumar and Achuthsankar S. Nair
    Lacunarity Analysis of Protein Sequences Reveal Fractal Like Behavior of Amino Acid Distributions
    ACC2011 Springer Proceedings, June 2011

  5. Pawan K. Dhar
    Finding New Laws in Biology
    Nature India, Mar 2011 [LINK]

  6. Pawan K. Dhar
    Biology by Design
    Nature India, February 2011 [LINK]

  7. Saritha Namboodiri, Chandra Verma, Pawan K. Dhar, Alessandro Giuliani, Achuthsankar S. Nair
    Sequence Signatures of Allosteric Proteins towards Rational Design
    Systems and Synthetic Biology, 271-280, Vol 4(4), doi: 10.1007/s11693-011-9072-9  [LINK]

  8. P. Umesh, F. Naveen, Chanchala Uma Maheswara Rao, Achuthsankar S. Nair
    Programming Languages for Synthetic Biology
    Systems and Synthetic Biology; 265 - 269, Vol 4(4), doi 10.1007/s11693-011-9070-y [LINK]

  9. Pawan K. Dhar
    Zincing towards Genome Engineering
    Nature India, January 2011 [LINK]

  10. Betsy Sheena Cherian, Achuthsankar S. Nair
    Protein location prediction using atomic composition and global features of the amino acid sequence
    Biochemical and Biophysical Research Communications; January 2010. [Impact Factor: 2.5]

  11. Pawan K. Dhar
    'Promoting' DNA Once Again
    Nature India, December 2010 [LINK]

  12. Pawan K. Dhar
    The Language of Life
    Nature India, October 2010 [LINK]

  13. Gopakumar G., Achuthsankar S. Nair
    Fractality of numeric and symbolic sequences
    IEEE Potentials, (ISSN: 0278-6648), Vol. 29, Issue 2
     March/ April 2010, pp. 36-39.  [H-Factor: 14]

  14. Arun K.S., Achuthsankar S. Nair
    60 years since “kpbw wcy xz” became more informative than “I love you”
    IEEE Potentials (ISSN: 0278-6648), Vol. 29, Issue 6
    Nov.-Dec. 2010, pp. 16 - 19. [H-Factor: 14]

  15. Vinod Chandra S.S., Reshmi G., Achuthsankar S. Nair, Sreenathan S. and M. Radhakrishna Pillai
    MTar: A Computational microRNA Target Prediction Architecture for Human Transcriptome
    BMC Bioinformatics (ISSN 1471-2105), Vol.10, S:1, pp. 1 – 9
    January 2010 (Impact factor–3.78 ) [Highly Accessed]

  16. Smitha Dharan, Achuthsankar S. Nair
    Biclustering of Gene expression Data using Reactive Greedy Randomized Adaptive Search Procedure, 
    BMC Bioinformatics, Vol 10, Suppl 1: s27, 2009.

  17. Lissy Anto P., Vrinda V. Nair, Achuthsankar S. Nair
    Phylogenic Reconstruction by Spectral Content Method
    International Conference SIWN Congress-BSB09 organized by Leipzig University, Germany, 23-25 March 2009.

  18. Vrinda V. Nair, Lissy Anto P., Achuthsankar S. Nair
    Naive Bayesian Classification of Unknown Sequence Fragments based on Chaos Game Representation of Mitochondrial Genomes
    International Conference SIWN Congress-BSB09 organized by Leipzig University, Germany, 23-25 March 2009.

  19. Achuthsankar S. Nair and T. Mahalakshmi
    Are categorical periodograms and indicator sequences of genomes spectrally equivalent?
    In Silico Biology, International Journal of Computational Molecular Biology , IOS Press, 6(2006), pp 215-222. (Download PDF)

  20. Achuthsankar S. Nair
    Combatting Diseases with Computer-Aided Drug Design
    IEEE Potentials, Vol 25, No.6 Nov/Dec 2006, pp 39-41.( Download PDF)

  21. Achuthsankar S. Nair , Sugunan V.S., Amjesh R., Prasanth V.
    Theoretical model for the structure of HCV NS3 Protease (Indian Strain)
    Brookhaven Protein Data Bank, Pdb id :2ijs, Released on 17 Oct 2006.

  22. Achuthsankar. S. Nair and Sreenadhan S.
    An improved digital filtering technique using nucleotide frequency indicators for locating exons
    Journal of the Computer Society of India, Vol. 36, No.1 , 2006, pp 60-66. (Download PDF)

  23. Pawan K. Dhar, A. Giuliani
    Laws in Biology: why so few?
    Sys. Synth. Biol 2010: 4, 7-13.

  24. Rao R,. Kyaw Tun, Yuko Makita, Lakshminarayanan S., Pawan K. Dhar
    Amino-acid Residue Association models for large scale protein-protein interaction prediction,
    In Silico Biology 2009: 9, 0015.

  25. Kyaw Tun, Raghuraj Rao, Lakshminarayan S., Pawan K. Dhar
    Rich can get poor – an evolutionary study of hub proteins
    Sys. Synth. Biol. 2009: 2(3-4), 75-82.

  26. Pawan K. Dhar
    The next step in biology: A periodic table?
    J. of Biosciences, 2007: 2(5), 1005-8.

  27. Pawan K. Dhar
    Systems Biology is all noise
    Current Science 2005: 88 (7), 1022-23.

  28. Hao Zhu, Yinghui Wu, Sui Huang, Yan Sun, Pawan K. Dhar
    Cellular Automata qith Object-Oriented Features For Parallel Molecular Network Modeling
    IEEE Transactions in NanoBioscience 2005: 4, 141-148.

  29. Pawan K. Dhar, Zhu Hao, Santosh Mishra
    Computational approach to systems biology: from fraction to integration and beyond
    IEEE Transactions on Nano-Bioscience 2004: 3, 144-152.

  30. Achuthsankar S. Nair & T. Mahalakshmi
    Visualisation of Genomic Data Using Inter-neucleotide Distance Signals
    Paper presented in the IEEE International Workshop on Genomic Signal Processing, Bucharest, July 2005.

  31. Achuthsankar S. Nair, Koshy P. Vaidyan
    Homology Modeling of Myoglobin using Adaptive Neurofuzzy Systems
    Proceedings of International Conference on Bioinformatics and Computational Biology ( BIOCOMP 2006), Las Vegas, USA, June 26-29, 2006, pp. 24-30.

  32. Vinod Chandra S.S., Achuthsankar S. Nair, Vrinda V. Nair, Mahalakshmi T.
    A Lingusitic Coloring Editor for Processing Mutilingual Text Corpora Using Hidden Markov Models
    Journal of the Computer Society of India, Vol 35, 2008.

  33. Achuthsankar S. Nair, Vrinda V. Nair, Arun K.S., Krishna Kant, Alpana Dey
    Bio-sequenceSignatures Using Chaos Game Representation
    Chapter in the book of Bioinformatics: Applications in Life and Environmental Sciences, published by Capital Publishing Company, New Delhi, 2008.

  34. Vinod Chandra S.S., Achuthsankar S. Nair.
    Se2Si: A Software Tool for Biological Sequence Analyser
    International Journal of Bioinformatics (ISSN 0973-2926), Vol. 2, No.2, pp. 696-703.

For complete list of publications of Dr. Achuthsankar S. Nair (which includes areas other than BIoinformatics), please visit http://achu.keralauniversity.edu/.