2012
Hodkinson, B. P. 2012. An evolving phylogenetically based taxonomy of lichens and allied fungi. Opuscula Philolichenum 11: 4-10. Hodkinson, B. P., and J. C. Lendemer. 2012. Phylogeny and taxonomy of an enigmatic sterile lichen. Systematic Botany: in press. Hodkinson, B. P., J. K. Uehling, and M. E. Smith. 2012. Lepidostroma vilgalysii, a new basidiolichen from the New World. Mycological Progress doi:10.1007/s11557-011-0800-z. Hodkinson, B. P., N. R. Gottel, C. W. Schadt, and F. Lutzoni. 2012. Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome. Environmental Microbiology 14(1): 147-161. [doi:10.1111/j.1462-2920.2011.02560.x] Lendemer, J. C., and B. P. Hodkinson. 2012. Recognition of the Parmelia crozalsiana group as the genus Crespoa. North American Fungi 7(2): 1-5. Lendemer, J. C., and B. P. Hodkinson. 2012. Molecular and morphological insights lead to a radical new taxonomy for Lepraria s.l., providing new perspectives on the evolution of asexual reproduction and diversification of thalline growth forms in lichen forming fungi. In review. Lendemer, J. C., M. N. Benatti, T. L. Esslinger, J. Hafellner, B. P. Hodkinson, K. Knudsen, and J. Kocourková. 2012. Notice of the formation of the International Committee for the Nomenclature of Lichens and Allied Fungi (ICNLAF). Opuscula Philolichenum 11: 1-3. Perlmutter, G. B., J. C. Lendemer, J. C. Guccion, R. C. Harris, B. P. Hodkinson, W. P. Kubilius, E. Lay, and H. P. Schaefer. 2012. A provisional survey of lichen diversity in the Augusta-Aiken area of South Carolina, USA. Opuscula Philolichenum: in revision. 2011 Hodkinson, B. P., and J. C. Lendemer. 2011. Punctelia eganii, a new species in the P. rudecta group with a novel secondary compound for the genus. Opuscula Philolichenum 9: 35-38. Hodkinson, B. P., and J. C. Lendemer. 2011. Molecular analyses reveal semi-cryptic species in Xanthoparmelia tasmanica. Bibliotheca Lichenologica 106: 115-126. Hodkinson, B. P., and J. C. Lendemer. 2011. The orders of Ostropomycetidae (Lecanoromycetes, Ascomycota): Recognition of Sarrameanales and Trapeliales with a request to retain Pertusariales over Agyriales. Phytologia 93(3): 407-412. Lücking, R., B. P. Hodkinson, A. Stamatakis, and R. A. Cartwright. 2011. PICS-Ord: Unlimited Coding of Ambiguous Regions by Pairwise Identity and Cost Scores Ordination. BMC Bioinformatics 12: 10. Lücking, R., F. Seavey, R. Common, S. Q. Beeching, O. Breuss, W. R. Buck, L. Crane, M. Hodges, B. P. Hodkinson, E. Lay, J. C. Lendemer, R. T. McMullin, J. A. Mercado-Díaz, M. P. Nelsen, E. Rivas Plata, W. Safranek, W. B. Sanders, H. P. Schaefer Jr., and J. Seavey. 2011. The lichens of Fakahatchee Strand Preserve State Park, Florida: Proceedings from the 18th Tuckerman Workshop. Bulletin of the Florida Museum of Natural History 49(4): 127-186. Schmull, M., J. Miadlikowska, M. Pelzer, E. Stocker-Wörgötter, V. Hofstetter, E. Fraker, B. P. Hodkinson, V. Reeb, M. Kukwa, H. T. Lumbsch, F. Kauff, and F. Lutzoni. 2011. Phylogenetic affiliations of members of the heterogeneous lichen-forming genus Lecidea sensu Zahlbruckner (Lecanoromycetes, Ascomycota). Mycologia 103(5): 983-1003. 2010 Hodkinson, B. P. 2010. A First Assessment of Lichen Diversity for One of North America's 'Biodiversity Hotspots' in the Southern Appalachians of Virginia. Castanea 75(1): 126-133. Hodkinson, B. P. 2010. Lichenological Diversity. The Bryologist 113(4): 828-829. Hodkinson, B. P., J. C. Lendemer, and T. L. Esslinger. 2010. Parmelia barrenoae, a macrolichen new to North America and Africa. North American Fungi 5(3): 1-5. Lendemer, J. C., and B. P. Hodkinson. 2010. A new perspective on Punctelia subrudecta in North America: previously-rejected morphological characters corroborate molecular phylogenetic evidence and provide insight into an old problem. The Lichenologist 42(4): 405-421. 2009 Hodkinson, B. P., and F. Lutzoni. 2009. A microbiotic survey of lichen-associated bacteria reveals a new lineage from the Rhizobiales. Symbiosis 49(3): 163-180. Hodkinson, B. P., R. C. Harris, and M. A. Case. 2009. A Checklist of Virginia Lichens. Evansia 26(2): 64-88. Lendemer, J. C., and B. P. Hodkinson. 2009. Stretching the boundaries: A range extension for Buellia wheeleri R.C. Harris. Evansia 26(4): 172-176. Lendemer, J. C., and B. P. Hodkinson. 2009. The Wisdom of Fools: new molecular and morphological insights into the North American apodetiate species of Cladonia. Opuscula Philolichenum 7: 79-100. Schoch, C. L., G.-H. Sung, F. López-Giráldez, J. P. Townsend, J. Miadlikowska, V. Hofstetter, B. Robbertse, P. B. Matheny, F. Kauff, Z. Wang, C. Gueidan, R. M. Andrie, K. Trippe, L. M. Ciufetti, A. Wynns, E. Fraker, B. P. Hodkinson, G. Bonito, R. Yahr, J. Z. Groenewald, M. Arzanlou, G. S. de Hoog, P. W. Crous, D. Hewitt, D. H. Pfister, K. Peterson, M. Gryzenhout, M. J. Wingfield, A. Aptroot, S.-O. Suh, M. Blackwell, D. M. Hillis, G. W. Griffith, L. A. Castlebury, A. Y. Rossman, H. T. Lumbsch, R. Lücking, B. Büdel, A. Rauhut, P. Diederich, D. Ertz, D. M. Geiser, K. Hosaka, P. Inderbitzin, J. Kohlmeyer, B. Volkmann-Kohlmeyer, L. Mostert, K. O’Donnell, H. Sipman, J. D. Rogers, R. A. Shoemaker, J. Sugiyama, R. C. Summerbell, W. Untereiner, P. Johnston, S. Stenroos, A. Zuccaro, P. Dyer, P. Crittenden, M. S. Cole, K. Hansen, J. M. Trappe, F. Lutzoni, and J. W. Spatafora. 2009. The Ascomycota Tree of Life: A Phylum Wide Phylogeny Clarifies the Origin and Evolution of Fundamental Reproductive and Ecological Traits. Systematic Biology 58(2): 224-239. 2008 & earlier Hodkinson, B. P., and M. A. Case. 2008. A lichen survey of Williamsburg, Virginia. Banisteria 31: 24-30. McCormick, M. K., D. F. Whigham, D. Sloan, K. O'Malley, and B. Hodkinson. 2006. Orchid-fungus fidelity: a marriage meant to last? Ecology 87(4): 903-911. Miadlikowska, J., F. Kauff, V. Hofstetter, E. Fraker, M. Grube, J. Hafellner, V. Reeb, B. P. Hodkinson, M. Kukwa, R. Lücking, G. Hestmark, M. Garcia Otalora, A. Rauhut, B. Büdel, C. Scheidegger, E. Timdal, S. Stenroos, I. Brodo, G. Perlmutter, D. Ertz, P. Diederich, J. C. Lendemer, P. May, C. L. Schoch, A. E. Arnold, C. Gueidan, E. Tripp, R. Yahr, C. Robertson, and F. Lutzoni. 2006. New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes. Mycologia 98(6): 1088-1103. Swaddle, J. P., M. G. Cathey, M. Correll, and B. P. Hodkinson. 2005. Socially transmitted mate preferences in a monogamous bird: a non-genetic mechanism of sexual selection. Proceedings of the Royal Society of London B: Biological Sciences 272(1567): 1053-1058. Selected Additional Works Armaleo, D., F. Lutzoni, F. Collart, S. Baker, J. Magnuson, O. Andresson, D. Auberry, D. Culley, F. Dietrich, I. Grigoriev, B. Hodkinson, S. Karpowicz, A. Kuo, P. Larsen, F. Martin, T. McDonald, S. Merchant, E. Morin, O. Mueller, E. Panisko, M. V. Sanchez, I. Small, B. B. Xavier. 2011. Systems Biology of Lichen Systems: Pure Cultures of Cladonia grayi and Lichen-Dominated Biological Soil Crusts. In: DOE Genomic Science: Systems Biology for Energy and Environment. Oak Ridge National Lab, Oak Ridge, Tennessee, 158-159. Hodkinson, B. P. 2011. Molecular Phylogenetics Workshop. In: American Bryological and Lichenological Summer Field Meeting. American Bryological and Lichenological Society, Lawrence, Kansas, pg. 11. Hodkinson, B. P., N. R. Gottel, C. W. Schadt, and F. Lutzoni. 2011. The Lichen Microbiome: Greater ecological complexity revealed by pyrosequencing. In: American Bryological and Lichenological Summer Field Meeting. American Bryological and Lichenological Society, Lawrence, Kansas, pp 5-6. Hodkinson, B. P., and J. C. Lendemer. 2011. Lichens of the Dismal Swamp: A case study on the role of floristics in advancing the fields of systematics, ecology, and biogeography. In: American Bryological and Lichenological Summer Field Meeting. American Bryological and Lichenological Society, Lawrence, Kansas, pg. 8. Cartwright, R., B.[P.]Hodkinson, A. Stamatakis, and R. Lücking. 2010. Extracting Phylogenetic Information from Ambiguous Regions through Multidemensional Scaling of Pairwise Likelihoods. In: Evolution 2010: Conference Program. Portland State University, Portland, Oregon, pg. 132 (abs. 901). Hodkinson, B. P., and F. Lutzoni. 2010. Do lichens harbor their own rhizobia? A large-scale phylogenetic survey of lichen-associated bacteria from the order Rhizobiales. Inoculum 61(4): 55-56. Hodkinson, B. P., and J. C. Lendemer. 2010. How do you solve a problem like Xanthoparmelia? Molecular analyses reveal semi-cryptic species in an Australasian-American 'disjunct' taxon. In: Botany 2010. Botanical Society of America, St. Louis, Missouri, abs. 355. Lendemer, J. C., R. C. Harris, and B. P. Hodkinson. 2010. Connecting the dots: progress and problems in assessing lichen biodiversity and biogeography in the coastal plain of southeastern North America. In: Botany 2010. Botanical Society of America, St. Louis, Missouri, abs. 30. Lendemer, J. C., B. P. Hodkinson, and M. Piercey-Normore. 2010. Cladonia Systematics: What can we infer from morphology and molecules? In: Botany 2010. Botanical Society of America, St. Louis, Missouri, abs. 1052. Hodkinson, B. P., and F. Lutzoni. 2009. Secret alliances: Patterns of association between lichens and non-photobiont bacteria. In: Botany and Mycology 2009: Abstract Book. Botanical Society of America, Granville, Ohio, pg. 249. Hodkinson, B. P., and F. Lutzoni. 2008. Lichen-associated non-photobiont bacteria: the third symbiont? Inoculum 59(4): 34. [Student Presentation Award: best student conference paper] Hodkinson, B. P., T. M. Loveless, P. E. Bishop, and F. Lutzoni. 2008. Nitrogen-fixing non-photobiont bacteria and lichens: an alternative lifestyle? In: The 6th IAL Symposium and Annual ABLS Meeting: Lichenological Abstracts. T. H. Nash III and M. R. D. Seaward (eds.). American Bryological and Lichenological Society and the International Association for Lichenology, Tempe, AZ, pg. 30. Hodkinson, B. P., and F. Lutzoni. 2007. Non-photosynthetic bacteria and the lichen symbiosis. In: ABLS Meeting, 2007, Xalapa, México: Abstracts. E. De Luna (ed.). INECOL, Xalapa, México, abs. O10. [A. J. Sharp Award: best student conference paper] Hodkinson, B. P., and M. A. Case. 2007. Lichen ecology in coastal ravines. In: ABLS Meeting, 2007, Xalapa, México: Abstracts. E. De Luna (ed.). INECOL, Xalapa, México, abs. P03. Hodkinson, B. P., F. M. Lutzoni, T. M. Loveless, and P. E. Bishop. 2006. Non-photosynthetic bacteria and the lichen symbiosis. In: 5th International Symbiosis Society Congress: Program, Abstracts, Participants. M. Bright, M. Horn, D. Zook, S. Lücker, and I. Kolar (eds.). Promare, Gdynia, Poland, pg. 95.
"Little progress can be made if new techniques are used only to replace, rather than complement, the old" (E.S. Luttrell, 1989). "Your observations are important to others" (Fortune Cookie, 2009). |
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molecular_phylogenetics_workshop
