[40] M. A. Serrano, A. Flammini, and F. Menczer Modeling Statistical Properties of Written Text PLoS ONE 4(4): e5372 (2009) [39] S. Fortunato, M. Bogugna, A. Flammini, and F. Menczer On Local Estimations of PageRank: A Mean Field Approach Internet Mathematics, 4, 245-266 (2009) [38] B. Goncalves, M. R. Meiss, J. J. Ramasco, A. Flammini, F. Menczer Remembering What We Like: Toward an Agent-Based Model of Web Traffic ACM Int. Conf. on Web Search and Data Mining -LateBreakingResults (WSDM 09) [37] M. Barthelemy and A. Flammini Modeling Urban Streets Patterns Physical Review Letters 100, 138702 (2008) [36] M. Barthelemy and A. Flammini Co-evolution of Traffic and Topology in a Simple Model of City Formation Networks and Spatial Economics, 9, 401-425, (2009) [35] M. Meiss, F. Menczer, S. Fortunato, A. Flammini, A. Vespignani Ranking Web Sites with Real User Traffic Proc. First ACM Int. Conf. on Web Search and Data Mining (WSDM 08) [34] A. Flammini and A. Stasiak On the Natural Classification of Knots II International Workshop on Knot Theory for Scientific Objects 2007 [33] Y. Burnier, C. Weber, A. Flammini, and A. Stasiak Local Selection Rules That Can Determine Specific Pathways of DNA Unknotting by Type II DNA Topoisomerases. Nucleic Acids Research, 35, 5223-5231, (2007) [32] A. Flammini and A. Stasiak On the Natural Classification of Knots Proceeding of the Royal Society A, 463, 569-582 (2007) [31] S. Fortunato and A. Flammini Random Walks on Directed Networks: The Case of Page Rank International Journal of Bifurcation and Chaos, 17, 2343-2353 (2007) [30] V. Colizza, A. Flammini, M. A. Serrano and A. Vespignani Detecting Rich-Club Ordering in Complex Networks Nature Physics 2, 110-115, (2006) [29] J. R. Banavar, M. Cieplak, A. Flammini, T. H. Hoang, R. D. Kamien, T. Lezon, D. Marenduzzo, A. Maritan, F. Seno, Y. Snir and A. Trovato. Geometry of Proteins: Hydrogen Bonding, Sterics and Marginally Compact Tubes. Physical Review E, 73, 031921, (2006). [28] S. Fortunato, A. Flammini, F. Menczer and A. Vespignani Topical Interests and the Mitigation of Search Engine Bias. Proceedings of the National Academy of Sciences 103, 12684-12689, (2006) [27] S. Fortunato, M. Bogugna, A. Flammini and F. Menczer How to Make the Top Ten: Approximating PageRank From In-Degree Proceedings of the Fourth Workshop on Algorithms and Models for the Web (WAW2006) Banff, CA, Springer series “Lecture Notes in Computer Science” [26] S. Fortunato, A. Flammini, and F. Menczer Scale-Free Network Growth by Ranking Physical Review Letters 96, 218701 (2006) [25] M. Barthélemy and A. Flammini Optimal Traffic Networks. Journal of Statistical Mechanics (2006) L07002 [24] V. Colizza, A. Flammini, A. Maritan and A. Vespignani Characterization and Modeling of Protein-Protein Interaction Networks Physica A, 352, 1-27, (2005) [23] D. Marenduzzo, A. Flammini, A. Trovato, J. R. Banavar and A. Maritan Physics of Thick Polymers Journal of Polymer Science. Part B: Polymer Physics 43, 650-679, (2005) [22] S. Pigolotti, A. Flammini, M. Marsili and A. Maritan Species Lifetime Distribution for simple Models of Ecology Proceeding of the National Academy of Science 102, 15747-15731, (2005) [21] J. R. Banavar, P. De Los Rios, A. Flammini, N. Holter and A. Maritan Scale-Free Behavior and Universality in Random Fragmentation and Aggregation Physical Review E, 69, 036123, (2004) [20] S. Pigolotti, A. Flammini and A. Maritan Stochastic Model for the Species Abundance Problem in an Ecological Community Physical Review E, 70, 011916, (2004) [19] A. Flammini, A. Stasiak and A. Maritan Simulations of Action of DNA Topoisomerases to Investigate Boundaries and Shapes of Spaces of Knots. Biophysical Journal, 87, 2698 - 2975, (2004) [18] A. Vazquez, A. Flammini, A. Maritan and A. Vespignani Global Protein Function Prediction From Protein-Protein Interaction Networks Nature Biotechnology 21, 697 - 700, (2003) [17] F. Bagnoli, F. Cecconi, A. Flammini and A. Vespignani Short Period Attractors and Non-Ergodic Behavior in the Deterministic, Fixed-Energy Sandpile Model Europhysics Letters 63, 512 - 518, (2003) [16] J. R. Banavar, A. Flammini, D. Marenduzzo, A. Maritan and A. Trovato Geometry of Compact Tubes and Protein Structures ComplexUs 1, 4 - 13, (2003) [15] A. Vazquez, A. Flammini, A. Maritan and A. Vespignani Modeling of Protein Interaction Networks ComplexUs 1, 38 - 44, (2003) [14] J. R. Banavar, A. Flammini, D. Marenduzzo, A. Maritan and A. Trovato Tubes Near the Edge of Compactness and Folded Protein Structures Journal of Physics: Condensed Matter 15, S1787 - S1796, (2003) [13] C. Micheletti, F. Cecconi, A. Flammini and A. Maritan Crucial Stages of Protein Folding Through a Solvable Model: Predicting Target Sites for Enzyme-Inhibiting Drugs Protein Science 11, 1878 - 1887, (2002) [12] A. Flammini, J. R. Banavar and A. Maritan Energy Landscape and Native State Structure of Proteins- a Simplified Model Europhysics Letters 58, 623 – 629, (2002) [11] J. R. Banavar, F. Colaiori, A. Flammini, A. Maritan, and A. Rinaldo Scaling, Optimality and Landscape Evolution Journal of Statistical Physics 104, 1 – 48, (2001) [10] R. C. Ball, G. Caldarelli and A. Flammini Angular Structure of Lacunarity and the Renormalization Group Physical Review Letters 85, 5134 – 5137, (2000) [9] J. R. Banavar, F. Colaiori, A. Flammini, A. Maritan, and A. Rinaldo Topology of the Fittest Transportation Network Physical Review Letters 84, 4745 – 4748, (2000) [8] M. R. Swift, F. Colaiori, A. Flammini, A. Maritan and A. Rinaldo Scaling Relationships in Agglomeration and Annhilation Models Physical Review Letters 79, 3278 – 3281, (1997) [7] J. R. Banavar, F. Colaiori, A. Flammini, A. Maritan, A Giacometti and A. Rinaldo Sculpting of a Fractal River Basin Physical Review Letters 78, 4522-4525, (1997) [6] F. Colaiori, A. Flammini, A. Maritan, J. R. Banavar Analytical and Numerical Study of Optimal Channel Networks Physical Review E 55, 1298 – 1310, (1996) [5] A. Rinaldo, A. Maritan, F. Colaiori, A. Flammini, M. R. Swift, R. Rigon, J. R. Banavar and I. Rodriguez Iturbe On Feasible Optimality Istituto Veneto di Scienze, Lettere ed Arti: Rapporti e Studi (1996) [4] A. Maritan, J. R. Banavar, M. Cieplak, F. Colaiori, A. Flammini, A. Giacometti, A. Rinaldo, I. Rodriguez-Iturbe Statistical Mechanics of River Networks Proceedings of STATPHYS19, Editor Hao Bailin, World Scientific, Singapore (1996) [3] A. Maritan, F. Colaiori, A. Flammini, M. Cieplak and J. R. Banavar Universality Classes of Optimal Channel Networks Science 272, 984 – 986, (1996) [2] A. Maritan, A. Rinaldo, F.Colaiori, A. Flammini, R. Rigon, I. Rodriguez-Iturbe and J. R. Banavar Thermodynamics of Fractal Networks Physical Review Letters 76, 3364 – 3367, (1996) [1] A. Flammini, F. Colaiori Exact Analysis of Peano Basin Journal of Physics A 29, 6701 – 6708, (1996) Non-Refereed Publications[O2] A. Vazquez, A. Flammini, A. Maritan, and A. Vespignani [O1] S. Fortunato, A. Flammini, F. Menczer, and A. Vespignani |