Available adenovirus sequences

Realm Varidnaviria, kingdom Bamfordvirae, phylum Preplasmiviricota, class Tectiliviricetes, order Rowavirales,

family Adenoviridae - 87 species

genus Mastadenovirus (in mammals) P 51 species (7 human AdV species) P

genus Aviadenovirus (birds) P 16 species (The first binomial name: Aviadenovirus leucophthalmi. All species proposed to be renamed.)

genus Atadenovirus (snakes, lizards, birds, ruminants, marsupials, tortoises) P 10 sp

genus Siadenovirus (birds, frog, Sulawesi tortoise) P P 8 species

genus Ichtadenovirus (fish) P 1 species

genus Testadenovirus (turtles/testudines) P 1 species

Proposal for renaming genus Atadenovirus (Bartadenovirus), creating 22 new species and rename all the 86 species with non-binomial names (excel table, doc file)
DOI: 10.13140/RG.2.2.31181.82408

Harrach B, Megyeri A, Papp T, Ursu K, Boldogh SA, Kaján GL (2023) A screening of wild bird samples enhances our knowledge about the biodiversity of avian adenoviruses. Vet Res Commun 47, 297-303

Podgorski II, Harrach B, Benkő M, Papp T (2023) Characterization of monkey adenoviruses with three fiber genes. Inf Genet Evol 108, 105403

Benkő M, Aoki K, Arnberg N, Davison AJ, Echavarría M, Hess M, Jones MS, Kaján GL, Kajon A, Mittal SK, Podgorski II, San Martín C, Wadell G, Watanabe H, Harrach B, ICTV Report Consortium (2022) ICTV Virus Taxonomy Profile: Adenoviridae 2022. J Gen Virol 103 (3) 001721

Dastjerdi A, Jeckel S, Davies H, Longue C, Plummer C, Vidovszky MZ, Harrach B, Williams J (2022) Novel adenovirus associated with necrotizing bronchiolitis in a reindeer (Rangifer tarandus). Transboundary and Emerging Diseases 69 (5) 3097-3102

Kraberger S, Oswald SA, Arnold JM, Schmidlin K, Custer JM, Levi G, Benkő M., Harrach B, Varsani A (2022) Novel adenovirus associated with common tern (Sterna hirundo) chicks. Arch Virol 167 (2) 659-663

Surplis A, Dill-Okubo J, Harrach B, Waltzek T, Subramaniam K (2022): Genomic characterization of psittacine adenovirus 2, a siadenovirus determined from a moribund African grey parrot (Psittacus erithacus). Arch Virol 167 (3) 911-916.

Vidovszky MZ, Böszörményi KP, Surján A, Varga T, Dán Á, Benkő M, Harrach B (2022) First DNA sequence proof for the occurrence of bovine adenovirus types 10 and 11 in continental Europe. Transbound Emerg Dis 69 (6) e3479-e3486

Zadravec M, Račnik J, Slavec B, Ballmann MZ, Kaján GL, Doszpoly A, Zorman-Rojs O, Marhold C, Harrach B (2022) Detection of adenoviruses in captive psittacine birds in Slovenia. Comp Immunol Microbiol Infect Dis 90-91, 101902

Official species names in magenta (the words "mastadenovirus, aviadenovirus, etc" omitted for clarity).

The proposed new human AdV genotypes (g) are mainly recombinants (r), which are shown with their penton/hexon(loop1+loop2)/fiber characterization.

Number of fiber genes and virus associated RNAs are shown. Own publication: P; 3D structure: 3D.

Further abbreviations and notes are below the table. Wikipedia links to the more exotic hosts.

panAdV PCR

mastAdV PCR P P P

P <<<<P>>> P P P P P

NEW 3D 3D 3D

3D 3D 3D 3D 3D 3D 3D 3D 3D 3D

Mast ITR E1a b IX IVa2 pol pTP VA 52 pIIIa III pVII V pX pVI II 23 DBP 100 33 pVIII E3 IV E4 ITR

Bovine A B1 + + + + + + + - + + + + + + + + + + + + + + 1 + + P

Bovine B B3 + + + + + + + - + + + + + + + + + + + + + + 1 + + 3D

Muntjac deer ~

Bovine C B10 + + + + + + + - + + + + + + + + + + + + + + "1.5" + + P P

Canine A C1 + + + + + + + - + + + + + + + + + + + + + + 1 + + P also in fennec fox

C2 + + + + + + + - + + + + + + + + + + + + + + 1 + + also in wolf 3D

vespertilionid 4 ~ ~ P ("serotine bat 2") Germany

great evening bat China ~ P (Ia io)

Pallas's long-tongued bat ~ Glossophaga soricina

Deer B deer-2 + + + + + + + - + + + + + + + + + + + + + + 1 + +

roe deer-1 ~

reindeer + + + + + + + - + + + + + + + + + + + + + + 1 + + P

Equine A E1 + + + + + + + - + + + + + + + + + + + + + + 1 + +

Equine B E2 + + + + + + + - + + + + + + + + + + + + + + 1 + +

Human A H12 + + + + + + + 1 + + + + + + + + + + + + + + 1 + + 3D

H18 + + + + + + + 1 + + + + + + + + + + + + + + 1 + +

H31 + + + + + + + 1 + + + + + + + + + + + + + + 1 + +

rH61 (31/61/31) + + + + + + + 1 + + + + + + + + + + + + + + 1 + +

chimp strain ch1+ + + + + + + 1 + + + + + + + + + + + + + + 1 + +

Western chimp 8 ~

Human B H3 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D 3D

H7 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D

H16 (16/4+16/16)+ + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D

H21 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D

H11 + + + + + + + + + + + + + + + + + + + + + + 1 + + 3D

H14 + + + + + + + + + + + + + + + + + + + + + + 1 + + 3D

H34 + + + + + + + + + + + + + + + + + + + + + + 1 + +

H35 + + + + + + + + + + + + + + + + + + + + + + 1 + + 3D

H50 + + + + + + + + + + + + + + + + + + + + + + 1 + +

rH55(14/11/14) + + + + + + + + + + + + + + + + + + + + + + 1 + +

rH66 (7/7/3) + + + + + + + + + + + + + + + + + + + + + + 1 + +

rH68 (16/3/16) + + + + + + + + + + + + + + + + + + + + + + 1 + +

S21ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S27.1ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S27.2go + + + + + + + + + + + + + + + + + + + + + + 1 + +

S28.1ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S28.2go + + + + + + + + + + + + + + + + + + + + + + 1 + +

S29ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S32ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S33ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S35.1ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S35.2bo + + + + + + + + + + + + + + + + + + + + + + 1 + +

S41.1go + + + + + + + + + + + + + + + + + + + + + + 1 + +

S46go + + + + + + + + + + + + + + + + + + + + + + 1 + +

S47go + + + + + + + + + + + + + + + + + + + + + + 1 + +

gorilla B7 ~ + + + + + + + + + ~

Grauer's gor+ + + + + + + + + + + + + + + + + + + + + + 1 + +

Western lowland gorilla 2 ~

Western lowland gorilla 3 ~

mountain gorilla 4 ~

mountain gorilla 5 ~

Human C B9 ^

H1 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H1 from cat ~ P

H2 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D 3D 3D 3D 3D

H5 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D 3D 3D 3D 3D 3D 3D

H6 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH57 (1/57/6) + + + + + + + + + + + + + + + + + + + + + + 1 + +

S31.1ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S34ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S40.1ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S42.1bo + + + + + + + + + + + + + + + + + + + + + + 1 + +

S43go + + + + + + + + + + + + + + + + + + + + + + 1 + +

S44bo + + + + + + + + + + + + + + + + + + + + + + 1 + +

S45go + + + + + + + + + + + + + + + + + + + + + + 1 + +

Chimp ChAd3 + + + + + + + + + + + + + + + + + + + + + + 1 + +

Chimp seq13 + + + + + + + + + + + + + + + + + + + + + + 1 + +

Chimp seq62 + + + + + + + + + + + + + + + + + + + + + + 1 + +

Chimp seq63 + + + + + + + + + + + + + + + + + + + + + + 1 + +

Grauer's gorilla ~ + ~

orangutan + + + + + + + + + + + + + + + + + + + + + + 1 + + lumc005 Netherlands

Human D H8 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D

H9 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H10 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H13 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H15 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H17 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H19 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D

H20 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H22 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H23 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H24 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H25 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H26 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D

H27 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H28 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H29 (29/15/29) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H30 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H32 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H33 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H36 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + P

H37 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D

H38 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H39 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H42 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H43 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H44 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H45 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H46 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H47 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H48 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D

H49 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

H51 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH53 (37/22/8) + + + + + + + 2 + + + + + + + + + + + + + + 1 + + P

gH54 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH56 (9/15/9) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH58 (58/58/29) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH59 (22/25/9) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH60(60/60+20/60)+ + + + + + + 2 + + + + + + + + + + + + + + 1 + +

gH62 + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH63 (30/30/29) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH64 (22/19/37) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH65 (58/10/9) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH67 (67/9/67) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH69 (53/15/69) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH70 (70/70/29) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH71 (9/20/71) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH73 (67/45/27) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH74 (P70H74F51)+ + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH75 (P75H26F29)+ + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH80 (19/28/12) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH81 (P65H48F60)+ + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH83 (P83H9F15) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH84 (P43H17F84)+ + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH85 (P37H19F8) + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

rH90 (P33H27H67)+ + + + + + + 2 + + + + + + + + + + + + + + 1 + +

P20H42F42 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + P

Eastern chimp 10 ~

Human E H4 + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D

S22ch + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

S23ch + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

S24ch + + + + + + + 2 + + + + + + + + + + + + + + 1 + +

S25ch + + + + + + + 2 + + + + + + + + + + + + + + 1 + + 3D

S26ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S30ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S36ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S36 ChAd63 + + + + + + + + + + + + + + + + + + + + + + 1 + +

S37.1ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S37.2bo + + + + + + + + + + + + + + + + + + + + + + 1 + +

S38ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

S39ch + + + + + + + + + + + + + + + + + + + + + + 1 + +

chimp ChAd6 + + + + + + + + + + + + + + + + + + + + + + 1 + +

chimp seq65 + + + + + + + + + + + + + + + + + + + + + + 1 + +

chimp Y25 + + + + + + + + + + + + + + + + + + + + + + 1 + +

Eastern chimp 1 ~

Eastern chimp 11 ~

Eastern chimp 12 ~

Eastern chimp 13 ~

Eastern chimp 14 ~

Weastern chimp 5 ~

Human F H40 + + + + + + + 1 + + + + + + + + + + + + + + 2 + + 1 fiber/penton

H41 + + + + + + + 1 + + + + + + + + + + + + + + 2 + + 1 fiber/penton 3D

Eastern chimp 3 ~

Western lowland gorilla 1 ~

moustached guenon ~

Human G H52 + + + + + + + 1 + + + + + + + + + + + + + + 2 + + P 3D

S1cy + + + + + + + 1 + + + + + + + + + + + + + + 2 + + P

S2rh + + + + + + + 1 + + + + + + + + + + + + + + 3 + +

Rh61 + + + + + + + + + + + + + + + + + + + + + + 3 + +

S7rh + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

S11rh + + + + + + + 1 + + + + + + + + + + + + + + 2 + + P

S12rh ~ ^ ~ P

S15rh o o o o ~ ~ o o o o o o o o o ~ o o o o o o 2 o o P

S51rh + + + + + + + + + + + + + + + + + + + + + + 2 + +

S52rh + + + + + + + + + + + + + + + + + + + + + + 2 + +

S53rh + + + + + + + + + + + + + + + + + + + + + + 2 + +

Rh54 + + + + + + + + + + + + + + + + + + + + + + 2 + +

Rh55 + + + + + + + + + + + + + + + + + + + + + + 3 + +

Rh56 + + + + + + + + + + + + + + + + + + + + + + 2 + +

Rh57 + + + + + + + + + + + + + + + + + + + + + + 3 + +

Rh58 + + + + + + + + + + + + + + + + + + + + + + 2 + +

Rh59 + + + + + + + + + + + + + + + + + + + + + + 3 + +

Rh60 + + + + + + + + + + + + + + + + + + + + + + 3 + +

Rh62 + + + + + + + + + + + + + + + + + + + + + + 2 + +

Rh63 + + + + + + + + + + + + + + + + + + + + + + 3 + +

Rh64 + + + + + + + + + + + + + + + + + + + + + + 3 + +

Rh65 + + + + + + + + + + + + + + + + + + + + + + 3 + +

Rh66 + + + + + + + + + + + + + + + + + + + + + + 3 + +

Rh67 + + + + + + + + + + + + + + + + + + + + + + 3 + +

Macaca fascicularis 1 ~

rhesus 1 ~

Simian A S3rh + + + + + + + 1 + + + + + + + + + + + + + + 1 + + P

S4rh ~ ^ ~ ~ ~ P

S6rh + + + + + + + 1 + + + + + + + + + + + + + + 1 + +

S9m ~ ~ ~ ~ ~ P

S10m ~ ~ ~ ~ ~ P

S14rh ~ ~ ~ ~ ~ P

S48cy + + + + + + + 1 + + + + + + + + + + + + + + 1 + +

Eastern chimp 2 ~

Simian B S5rh ~ ~ ~ P

S8cy + + + + + + + 1 + + + + + + + + + + + + + + 2 + + P

S49cy + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

S50cy + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

rh strains A1139 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

A1163 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

A1173 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

A1258 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

A1285 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

A1296 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

A1312 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

A1327 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

A1335 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

baboon-1 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

cynomolgus-1 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

Simian C S19yb + + + + + + + 1 + + + + + + + + + + + + + + 2 + + P

baboon-2 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

baboon-3 + + + + + + + 1 + + + + + + + + + + + + + + 2 + +

Simian D S13m + + + + + + + 1 + + + + + + + + + + + + + + 1 + + P

Simian E S16gr + + + + + + + 1 + + + + + + + + + + + + + + 2 + + P

Simian F S17gr + + + + + + + 1 + + + + + + + + + + + + + + 3 + +

S18gr + + + + + + + 1 + + + + + + + + + + + + + + 1 + +

Simian G S20gr + + + + + + + 1 + + + + + + + + + + + + + + 1 + +

Simian H S54rh23336+ + + + + + + 1 + + + + + + + + + + + + + + 1 + +

Simian I S55 WIV19 + + + + + + + 1 + + + + + + + + + + + + + + 1 + + golden snub-nosed monkey

Old World monkeys Assam macaque ~ ~

black-and-white colobus 1 ~

black-and-white colobus 2 ~

black-and-white colobus 3 ~

black crested mangabey ~

Campbell's mona monkey ~

mona monkey ~

New World monkeys

Platyrrhini A titi + + + + + + + 1 + + + + + + + + + + + + + + 1 + + coppery titi

squirrel monkey 1+ + + + + + + 1 + + + + + + + + + + + + + + 1 + + black-capped squirrel monkey

cotton-top tamarin ~ ~

cotton top tamarin ~ P

red-handed tamarin-1 ~ P

red-handed tamarin-2.1 ~ P

red-handed tamarin-2.2 ~ P

common squirrel monkey-1 ~ P

common squirrel monkey-2 ~ P

common squirrel monkey-3 ~ P

red-bellied tamarin ~ P

golden-headed lion tamarin ~ P

tufted capuchin monkey-1 ~ P

tufted capuchin monkey-2 ~ P

tufted capuchin monkey-3 ~ P

gray-bellied night monkey ~ P

red-faced spider monkey ~ P

marmoset-1.1 ~ P

marmoset-1.2 ~ P

common marmoset ~ P

black howler monkey ~

Prosimians

grey mouse lemur + + + + + + + + + + + + + + + + + + + + + 1 + + strain 204

r-grey mouse l. + + + + + + + + + + + + + + + + + + + + + 1 + + reddish-grey mouse lemur strain 204 NEW

ring-tailed lemur ~ P

black-and-white ruffed lemur ~ P

eastern lesser bamboo lemur ~ P

red-fronted lemur ~ P

red-fronted lemur-1 ~ P

red-fronted lemur-2.1 ~ P

red-fronted lemur-2.2 ~ P

black lemur-1 ~ P

black lemur-2 ~ P

black lemur-3 ~ P

crowned lemur ~ P

Murine A M1 + + + + + + + - + + + + + + + + + + + + + + 1 + + 3D

Murine B M2 + + + + + + + - + + + + + + + + + + + + + + 1 + + P 3D

Murine C M3 + + + + + + + - + + + + + + + + + + + + + + 1 + +

rat ~

rat

deer mouse ~

Chinese striped hamster ~

Daurian ground squirrel ~

Southwest China vole ~

Muton's soft-furred mouse ~ Congo

striped mouse ~ Congo

giant pouched rat ~ Congo

lesser ricefield rat ~ China

Guyenne spiny rat ~ French Guiana

marmot-1 + + + + + + - + + + + + + + + + + + + + + 1 + China NEW XJ96C

marmot-2 + + + + + - + + + + + + + + + + + + + + 1 China NEW XJ11C

marmot-3 + + - + + + + + + + + + + + China NEW XJ72C

marmot-4 ~ ~ China

Ovine A O2 +

O3 o + ~ + ~ o P

O4 +

O5 +

B2 + + + + + + + - + + + + + + + + + + + + + + 1 + + P

Ovine B 01 ^ +

G2 +

Ovine C O8 + + + + + + + - + + + + + + + + + + + + + + 1 + +

O6 ^ ~

Porcine A P1 + + + ~ +

P2 o o o

P3 + + + + + + + - + + + + + + + + + + + + + + 1 + +

Porcine B P4 + + + + + + + - + + + + + + + + + + + + + + 1 + + 3D

Porcine C P5 + + + + + + + - + + + + + + + + + + + + + + 1 + +

porcine Wisconsin ~

porcine Slovenia ~

Sea lion A Calif.+ + + + + + + - + + + + + + + + + + + + + + 1 + +

Calif. (Jap) ~ Case-1

(South American) ~

South American fur seal ~

Dolphin A bottlenose2+ + + + + + - + + + + + + + + + + + + + + 1 +

Dolphin B bnose1 + + + + + + + - + + + + + + + + + + + + + + 1 + +

h arbour porpoise + + + + + - + + + + + + + + + + + + + ~

bowhead whale ~

Polar bear A + + + + + + + - + + + + + + + + + + + + + + 1 + +

weasel 1 ~ ~ NEW Hungary

Skunk A Sk1 + + + + + + + - + + + + + + + + + + + + + + 1 + + also four-toed hedgehog, porcupine, raccoon

pigmy marmoset + + + + + + + - + + + + + + + + + + + + + + 1 + +

Tree shrew A TS1 + + + + + + + - + + + + + + + + + + + + + + 1 + +

Guinea pig A GP1 + + + + + + + - + + + + + + + + + + + + + + 1 + +

Squirrel A Sq1 + + + + + + + - + + + + + + + + + + + + + + 1 + + P red squirrel Germany

Sq2 + + red squirrel Korea

alpaca ~ ~

rabbit ~

cat ~ ~ P

ocelot ~

small Indian mongoose ~ Mon-34

Asian house shrew ~ China (Bangladesh)

BATS

Bat A bat 3 + + + + + + + - + + + + + + + + + + + + + + 1 + + TJM Rickett's big-footed bat China

Mm32 + + + + + + + - + + + + + + + + + + + + + + 1 + + eastern long-fingered bat Japan

Bat B bat 2 + + + + + + + - + + + + + + + + + + + + + + 1 + + P

Bat C WIV9 + + + + + + + - + + + + + + + + + + + + + + 1 + +

Rc-kw20 + + + + + + + - + + + + + + + + + + + + + + 1 + + little Japanese horsehoe bat Japan

Bat D WIV12 + + + + + + + - + + + + + + + + + + + + + + 1 + +

Bat E WIV13 + + + + + + + - + + + + + + + + + + + + + + 1 + +

Bat F WIV17 + + + + + + + - + + + + + + + + + + + + + + 1 + +

WIV18 + + + + + + + - + + + + + + + + + + + + + + 1 + +

Bat G 250-A + + + + + + + - + + + + + + + + + + + + + + 1 + + Corynorhinus rafinesquii

Bat H + + + + + + + - + + + + + + + + + + + + + + 1 + + straw-colored fruit bat 06-106

Bat I + + + + + + + - + + + + + + + + + + + + + + 1 + + Egyptian fruit b.

Bat J + + + + + + + - + + + + + + + + + + + + + + 1 + + Vs9 Asian parti-colored bat

candidate new sp.+ + + + + + + - + + + + + + + + + + + + + + 1 + + Gould's wattled bat Australia WA3301

bat 1 (flying fox) ~ ~ ~

African sheath-tailed bat ~ Kenya

brown long-eared bat 1 ~ P

cave nectar bat ~ Singapore

common bent-winged bat ~ Croatia

common noctule 2 ~ ~ P

common noctule 3 ~ ~ P

common pipistrelle 2 ~ P

common pipistrelle 3 ~ ~ P

common pipistrelle 4 ~ ~ P

Egyptian tomb bat + Saudi Arabia

fringed long-footed myotis ~

Geoffroy's bat 1 ~ ~ P

greater horseshoe bat 1 ~ ~ P P

greater mouse-eared bat M78-28 ~

greater mouse-eared bat 1 ~ ~ P

greater short-nosed fruit bat ~ China

great roundleaf bat ~

grey long-eared bat ~ ~ P P Hungary

heart-nosed bat ~ Kenya

Horsfield's bat ~

Kuhl's pipistrelle 1 ~ P

large-eared free-tailed bat ~ Kenya

least horseshoe bat ~ China

least longfingered bat ~ Kenya

Leschenault's Rousette fruit b. ~ ~

lesser Asiatic yellow bat ~

lesser horseshoe bat 1 ~ ~ P P

lesser mouse-eared bat ~ ~ P

lesser noctule 1 ~ ~ P

lesser noctule 2 ~ P

lesser noctule 3 ~ P

lesser noctule 4 ~ P

Med. horseshoe bat 1 ~ ~ P

Med. horseshoe bat 2 ~ P

Mediterranean horseshoe bat 3 ~ P

Mediterranean horseshoe bat 4 ~ P

Med. horseshoe bat Reu_A15OPS ~

Med. horseshoe bat Rheu_40409-2 ~

Nathusius' pipistrelle 1 ~ P

northern bat 1 ~ ~ P

parti-coloured bat ~ ~ P

pond bat 1 ~ ~ P

Rickett's big-footed bat ~

Rüppel's horseshoe bat ~ Kenya

Savi's pipistrelle ~

serotine bat 1 ~ ~ P

soprano pipistrelle 1 ~ ~ P

soprano pipistrelle 2 ~ ~ P

soprano pipistrelle 3 ~ P

soprano pipistrelle 4 ~ P

Sundewall's roundleaf bat ~ Kenya

vespertilionid 1 c. noctule ~ ~ P

whiskered bat ~ P

Nathusius' pipistrelle ~ P

vespertilionid 2 com. pipist. ~ P

common noctule 1 ~ ~ P P

vespertilionid 3 com. noctule ~ P

greater noctule bat ~ P

unknonw bat species/USA ~

Neoromicia capensis V4 ~

Neoromicia capensis V18 ~

Neoromicia helios V13 ~

Neoromicia nanus V12 ~

Neoromicia C52222 ~

Avi ITR parvo-NS1 IVa pol pTP 52 pIIIa III pVII pX pVI II 23 DBP 100 33 pVIII IV ORFs ITR

dUTPase ORFs

Falcon A falcon 1 ~ + + + + + Aplomado falcon

American kestrel + + + + + + + + + + + + + + + + + + 1 ~

Orange-breasted falcon ~

Teita falcon ~ gyrfalcon

Fowl A F1 + + + + + + + + + + + + + + + + + + + 2 + + 2 fibers/penton 3D 3D 3D also Alagoas curassows

Fowl B F5 + + + + + + + + + + + + + + + + + + + 1 + + P P 2 fibers/penton

+ + + + + + + + + + + + + + + + + + + 1 + + P strain 40440-M/2015 Debrecen

Fowl C F4 + + + + + + + + + + + + + + + + + + + 2 + + P 2 fibers/penton, chicken, duck

F10 + + + + + + + + + + + + + + + + + + + 2 + + P P 2 fibers/penton

Fowl D F2 + + + + + + + + + + + + + + + + + + + 1 + + P P P 2 fibers/penton

F3 + + + + + + + + + + + + + + + + + + + 1 + + P P P 2 fibers/penton

F9 + + + + + + + + + + + + + + + + + + + 1 + + 2 fibers/penton

F11 + + + + + + + + + + + + + + + + + + + 1 + + P P 2 fibers/penton

Fowl E F6 + + + + + + + + + + + + + + + + + + + 1 + + P P 2 fibers/penton

F7 + + + + + + + + + + + + + + + + + + + 1 + + P P 2 fibers/penton

F8a + + + + + + + + + + + + + + + + + + + 1 + + P 2 fibers/penton

F8b + + + + + + + + + + + + + + + + + + + 1 + + P P 2 fibers/penton

Goose A Go1 ^

Go2 ^

Go4 + + + + + + + + + + + + + + + + + + + 2 + + P domestic goose, lion head goose

Go5 ~ ~ P

Turkey B T1 + + + + + + + + + + + + + + + + + + + 2 + + P

Turkey C T4 + + + + + + + + + + + + + + + + + + + 1 + + P

Turkey D T5 + + + + + + + + + + + + + + + + + + + 2 + + P

unassigned T2 ^ ~ P

Pigeon A Pi1 + + + + + + + + + + + + + + + + + + + 2 + + P

Pigeon B Pi2 + + + + + + + + + + + + + + + + + + + 2 + + P

strain FJ2017 +

unassigned Pi3 ~ P

Duck B D2 + + + + + + + + + + + + + + + + + + + 1 + + P Muscovy duck, France

D3 + + + + + + + + + + + + + + + + + + + 2 + + Muscovy duck, China

D4 + + + + + + + + + + + + + + + + 2 + Muscovy duck, China

D5 + + + + + + + + + + + + + + + + + + 1 + Australia duck

Pacific black d . + + + + + + ~ + + + + + + + + + + + ~ ~ ~ ~ Australia Pacific black duck

Psittacine B Ps4 + + + + + + + + + + + + + + + + + + + 2 + + red-bellied parrot

Psittacine C Ps1 + + + + + + + + + + + + + + + + + + + 2 + + Senegal parrot Germany, Italy

red-fronted parrot ~ Taiwan

Ps8 ~ Meyer's parrot

Aviadenovirus leukophtalmi

wh-eyed parakeet 2 + + + + + + + + + + + + + + + + + 2 ~ white-eyed parakeet

owl + + + + + + + + + + + + + + + + + + + 2 + + Indian eagle-owl

crane 1 + + + + + + + + + + + + + + + + + 1 ~

tawny frogmouth + + + + + + + + + + + + + + + + + + + 2 + +

woodpecker + + + + + + + + + + + ~ wpk049ade02nc white-backed woodpecker

eastern yellow robin ~

gull ~ + + European herring gull

~ Caspian tern

great cormorant + + + + + + + + + + + + + + + + + 2 + NEW Kazakhstan

neotropic cormorant ~

"marten 1" (associated) ~ + ~ ~ ~ ~ ~ + ~ ~ ~

tropical screech owl 2 ~ strain Aichi10341

smooth-billed ani ~ P

great tit 4 ~ Germany strain 4792

Eurasian blackcap 2 ~ Hungary MA61

lesser whitethroat 1 ~ Hungary MA55

3D 3D

At ITR LH1+2 IVa pol pTP 52 pIIIa III pVII pX pVI II 23 DBP 100 33 pVIII IV E4 ITR

32K LH3 RH-ORFs

RUMINANTS

Ovine D O7 + + ++ + + + + + + + + + + + + + + + + 1 + + +

G1 ~

Bovine D B4 + + ++ + + + + + + + + + + + + + + + + 1 + + + P P 3D

B5 + ~ + P

B8 ~ ^

Rus + + ~ o o o o o o o o o o o o o o o o 1 o o + P P

Bovine E B6 + + ++ + + + + + + + + + + + + + + + + 1 + + + P

Bovine "F" B7 + + ++ + + + + + + + + + + + + + + + + 1 + + +

Deer A deer 1 + + ++ + + + + + + + + + + + + + + + + 1 + + + Odocoileus 1

MARSUPIALS

Possum A Po1 ^ + ^ + + P

agile wallaby + -+ + + + + + + + + + + + + + + + + 1 + +

BIRDS

Duck A D1 + + -+ + + + + + + + + + + + + + + + + 1 + + + P

Psittacine A P3 + + -+ - + + + + + + + + + + + + + + + 2 + + + southern mealy amazon

wh-e parakeet 1 + + + + + + + ~ + + + + + + + 2 + + white-eyed parakeet

P9 ~ cockatiel

P10 ~ rose-ringed parakeet

Ps11 + ?+ - + + + + + + + + + + + + + + + 2 + + blue-troated macaw (par083ade1)

Eastern spinebill + + -+ + + + + + + + + + + + + + + + + 1 + + + ("passerine AdV-1")

common tern + + -+ + + + + + + + + + + + + + + + + 1 + + + P USA, Russia

proposed new sp. ~ + + + + + + + + + + + + + + + + + ~ yellow-browed warbler

prop. new sp. ~ -+ + + + + + + + + + + + + + + + + + + ~ Radde's warbler warbler2003

amniote 1 ~ + + + + + + + + + + + +

pine grosbeak + + + + + + + + + + + + + + + + gbk055ade1nc

scaly thrush +19K+ -+ + + + + + + + + + + + + + + + + 1 + + + NEW (Zoothera dauma) China 39% GC

grey warbler + + + + + + + + + + + + + + + + 1 + + NEW New Zealand

chimney swift ~

European robin ~

Eurasian siskin ~

long-billed corella ~

long-tailed finch Estreldidae-2 ~

sulphur-crested cockatoo ~ Australia

tropical screech owl 1 ~ P Brazil

vitelline masked weaver ~ strain 37869 Germany

white-plumed honeyeater 2 ~ strain WHC1082

white-plumed honeyeater 1 ~ strain WHC1081

SQUAMATES

Lizard A Li2 + + ++ + + + + + + + + + + + + + + + + 2 + + + P 1 or 3 fibers/penton Mexican beaded lizard,

gila, death adder, western bearded dragon, captive bearded dragon

lizard 1 (gila) ~ P gila monster

Lizard B BD1 + + ++ + + + + + + + + + + + + + + + + 1 + + + P P bearded dragon

lizard-K1 (Korea) ~ East African spiny-tailed lizard

Snake A Sn1 + + ++ + + + + + + + + + + + + + + + + 1 + + + P P corn snake, boa, python 3D 3D

corn snake GER09 ~ P

unassigned Sn2 ~ eastern corn snake, California kingsnake, asp viper

Sn3 ~ gopher snake

chameleon 1 (mountain chameleon) ~ P

cham. 2 (Jackson's chameleon) ~ P

gecko (Eublepharid/fat-tailed g) ~ P

gekkonid (tokay gecko) ~ P

scincid (blue-tongued skink) ~ P

viperid (Parias hageni) ~

emerald monitor (varanid) ~ P

anolis 1 (bark anole) ~

anolis 2 (bark anole) ~

anolis 3 (green anole) ~ P

lacertid 1 ~ P

lacertid 2 ~ P

long-t grass lizard ~ ~ ~ + +

sand lizard ~ common lizard GB

amphisbaenian 1 ~ ~ + + P

Japalura tree dragon 1 ~ P

short-t pygmy chame ~ ~ + + ~

white-throated monitor ~ ~ + + ~ ~

TORTOISE

Greek (spur-thighed) tortoise 1 ~

Greek (spur-thighed) tortoise 2 ^

Russian (Horsfield's) tortoise ~

Aldabra giant toroise ~ NEW USA R21-186

3D

Si ITR sial ORF4 IVa pol pTP 52 pIIIa III pVII pX pVI II 23 DBP 100 33 pVIII E3 IV ORF7 ITR

hydrophobic ORF8

Frog A Fr1 + + + - + + + + + + + + + + + + + + + + 1 + + + P

Raptor A raptor 1+ + + + + + + + + + + + + + + + + + + + 1 + + + P P P P 3D Harris-hawk, Verreaux's+Indian eagle-owl

raptor 2 ~ red-tailed hawk, broad-winged hawk USA

Turkey A T3/THEV + + + + + + + + + + + + + + + + + + + + 1 + + + P 3D

Great tit A GT1 ~ + + + + + + + + ~ great tit 5957/SZ, 48820, blue tit 425

great tit 3 + + + + + + + + + + + + + + + + + + + + 1 + + + Germany strain 478 P

great tit 2 ~ Germany strain 49056

Skua A + + + + + + + + + + + + + + + + + + + + 1 + + + South Polar skua

Penguin A ChP2 + - + + + + + + + + + + + + + + + + + + 1 + + + chinstrap penguin

GPAdV-4 + - + + + + + + + + + + + + + + + + + + 1 + + + gentoo penguin

psittacine 2 + + + + + + + + + + + + + + + + + + + + 1 + + + P African grey parrot, plum headed parakeet, umbrella cockatoo...

Psittacine D Ps5 + + + + + + + + + + + + + + + + + + + + 1 + + + Pacific parrotlet

+ + + + + + + + + + + + + + + + + + + + 1 + + + sun parakeet (sun conure)

~ + + + + ~ cockatiel

~ budgerigar strain Japan:Gifu

~ budgerigar strain USA/IA43444/2016

Ps6 + + + + + + + + + + + + + + + + + + + + 1 + + + budgerigar strain BrdKdnyDNA

rainbow lorikeet ~

Psittacine E Ps7 + + + + + + + + + + + + + + + + + + + + 1 + + + little corella

Gouldian finch ~ + ~ ~ P

common murre + + + + + + + + + + + + + + + + + + + + 1 + + +

long-tailed finch/Estrildidae-1 ~

zebra finch ~

Eurasian blackbird ~ ~ +

Eurasian blackcap 1 ~ Germany (Hungary: MA81)

pigeon 4 ~ ~ P

pigeon 5 ~ P

spotted pardalote ~ Australia

Sulawesi tortoise ~

diamondback terrapin ~ New York, USA NEWEST

superb fairywren ~ Australia

yellow cardinal ~ Brazil

Icht

Sturgeon A WS1 + - - - + + + + + + + + + + + + + + + + - - - + P P P white sturgeon

Test

Pond slider A red-eared 1 ~ + + + + + + + + ~ red-eared slider P

ornate box turtle ~

eastern box turtle ~ ~ P

pancake tortoise ~ P

yellow-bellied slider ~ ~ P

red-footed tortoise 1 ~ ~

red-footed tortoise 2 ~

black pond turtle ~

Hermann's tortoise ~

Galápagos tortoise ~ Ecuador

Blanding's turtle 1 ~ "Emydoidea AdV-1" Blandings's turtle USA

saw-shelled turtle 1 ~ Australia

saw-shelled turtle 2 ~ Australia

saw-shelled turtle 3 ~ Australia

Serotypes, even from different hosts, are grouped into species, according to calculated phylogenetic distance, genome organization, DNA hybridization, GC content, cross-neutralization, possibility of recombination, hemagglutination and oncogenic potential. E.g., most chimpanzee AdVs and human adenovirus 4 are so similar that they are just different members of species Human mastadenovirus E. The serotypes often have different strains/variants, but we do not show more than one from each serotype (from a single host).

Signs: + full gene sequence available

o full gene sequence not released yet

~ partial gene sequence available

^ partial gene sequence not released yet

- corresponding gene is missing from the genome

Comment: Some genes were sequenced and submitted in multiple parts, thus they are referred

in this table with close but divided ~ ~ signs.

Abbreviations for host species: B: bovine, Bt: bat, C: canine, D: duck, E: equine, F: fowl,

Fr: frog, G: goat Go: goose, GP: guinea pig, H: human, M: murine, O: ovine, Od: Odocoileus (black-tailed deer),

P: porcine, Pi: pigeon, S: simian (SAdV-1 to 20 are from Old World monkeys, 21 to 25 from chimpanzee),

Sn: Snake, Sq: squirrel, T: turkey, TS: tree shrew (tupaia), WS: white sturgeon, bo: bonobo (Pan paniscus)

ch: chimpanzee (Pan troglodytes), cy: cynomolgus monkey (Macaca fascicularis), go: gorilla,

gr: grivet (Chlorocebus aethiops), m: macaque sp, rh: rhesus macaque (Macaca mulatta), yb: yellow baboon (Papio cynocephalus).

Remember: Human adenovirus 5 is not Ad5 as there are animal serotype 5 AdVs, e.g. BAdV-5, FAdV-5, OAdV-5, SAdV-5; and species

Human mastadenovirus C is not 'adenovirus species C' as also other AdV species have C in their names (Fowl aviadenovirus C, Bovine mastadenovirus C, etc.).

Our recent publications on AdVs and related taxonomy

Harrach B, Benkő M (2021) Adenoviruses (Adenoviridae). In: Bamford D, Zuckerman M (eds) Encyclopedia of Virology 4th edition, Academic Press, Vol 2. pp. 3-16 doi.org/10.1016/B978-0-12-814515-9.00057-6 (for a copy, write to harrach.balazs@vmri.hu)

Böszörményi KP, Podgorski II, Vidovszky MZ, Sós E, Benkő M, Harrach B (2020) Full genome sequence analysis of a novel adenovirus from a captive polar bear (Ursus maritimus). Virus Research 277, 197846

de Oliveira APJ, Rangel MCV, Vidovszky MZ, Rossi JL Jr, Vicentini F, Harrach B, Kaján GL (2020) Identification of two novel adenoviruses in smooth-billed ani and tropical screech owl. PLoS One 15 (2) e0229415

Pénzes J, Szirovicza L, Harrach B (2020) The complete genome sequence of bearded dragon adenovirus 1 harbors three genes encoding proteins of the CLTD superfamily. Infect Genet Evol 83, 104321

Doszpoly A, Harrach B, LaPatra S, Benkő M (2019) Unconventional gene arrangement and content revealed by full genome analysis of the white sturgeon adenovirus, the single member of the genus Ichtadenovirus. Infection, Genetics and Evolution, 75, 103976

Harrach B, Tarján ZL, Benkő M (2019) Adenoviruses across the animal kingdom: a walk in the zoo. FEBS Letters 593 (24) 3660-3673

Kaján GL, Affranio I; Tóthné Bistyák A; Kecskeméti S; Benkő M. (2019) An emerging new fowl adenovirus genotype. Heliyon 5 (5) e01732

Vidovszky MZ, Szeredi L, Doszpoly A, Harrach B, Hornyák Á (2019) Isolation and complete genome sequence analysis of a novel ovine adenovirus type representing a possible new mastadenovirus species. Arch Virol 164 (8) 2205-2207

Lenman A, Liaci AM, Liu Y, Frängsmyr L, Frank M, Blaum BS, Chai W, Podgorski II, Harrach B, Benkő M, Feizi T, Stehle T, Arnberg N (2018) Polysialic acid is a cellular receptor for human adenovirus 52. Proc Natl Acad Sci U S A. 115 (18) E4264-E4273

Podgorski II, Pantó L, Földes K, de Winter I, Jánoska M, Sós E, Chenet B, Harrach B, Benkő M, (2018) Adenoviruses of the most ancient primate lineages support the theory on virus-host co-evolution. Acta Vet Hung 66 (3) 474-487

Singh AK, Nguyen TH, Vidovszky MZ, Harrach B, Benkő M, Kirwan A, Joshi L, Kilcoyne M, Berbis MÁ, Cañada FJ, Jiménez-Barbero J, Menéndez M, Wilson SS, Bromme BA, Smith JG, van Raaij MJ (2018) Structure and N-acetyl glucosamine binding of the distal domain of murine adenovirus 2 fibre. J Gen Virol 99 (11) 1494-1508

Ballmann MZ, Harrach B (2016) Detection and partial genetic characterization of novel avi- and siadenoviruses in racing and fancy pigeons (Columba livia domestica). Acta Vet. Hung. 64 (4) 514–528

Gilson T, Blanchette P, Ballmann MZ, Papp T, Pénzes JJ, Benkő M, Harrach B, Branton PE (2016) Using the E4orf6-based E3 ubiquitin ligase as a tool to analyze the evolution of adenoviruses. J Virol 90 (16) 7350-7367

Nguyen TH, Ballmann MZ, Do HT, Truong HN, Benkő M, Harrach B, van Raaij MJ (2016) Crystal structure of raptor adenovirus 1 fibre head and role of the beta-hairpin in siadenovirus fibre head domains. Virol J 13:106

Podgorski II, Pantó L, Papp T, Harrach B, Benkő M (2016): Genome analysis of four Old World monkey adenoviruses supports the proposed species classification of primate adenoviruses and reveals signs of possible homologous recombination. J Gen Virol 97 (7) 1601-1614 ) doi: 10.1099/jgv.0.000465

Nguyen TH, Vidovszky MZ, Ballmann MZ, Sanz-Gaitero M, Singh AK, Harrach B, Benkő M, van Raaij MJ (2015) Crystal structure of the fibre head domain of bovine adenovirus 4, a ruminant atadenovirus. Virol J 12:81

Pantó L, Podgorski II, Jánoska M, Márkó O, Harrach B (2015) Taxonomy proposal for Old World monkey adenoviruses − characterisation of several non-human, non-ape primate adenovirus lineages. Arch Virol 160:3165-3177

Singh AK, Berbís MÁ, Ballmann MZ, Kilcoyne M, Menéndez M, Joshi L, Jiménez-Barbero J, Benkő M, Harrach B, van Raaij MJ (2015) Structure and sialyllactose binding of the carboxy-terminal head domain of the fibre from a siadenovirus, turkey adenovirus 3. PLoS One 10(9):e0139339

Vidovszky MZ, Kohl C, Boldogh S, Görföl T, Wibbelt G, Kurth A, Harrach B (2015) Random sampling of the Central European bat fauna reveals the existence of numerous hitherto unknown adenoviruses. Acta Vet Hung 63 (4) 508-525

15th International Adenovirus Meeting, Croatia, September 24-28, 2023

14th International Adenovirus Meeting, on-line (Spain) 18-22 May 2021

13th International Adenovirus Meeting, Hacienda Vista Hermosa, San José Vista Hermosa, Mexico, 25-29 September 2018,

10th International Symposium on Viruses of Lower Vertebrates (ISVLV), Budapest, Hungary, 4-7 June 2017

12th International Adenovirus Meeting, Barsinghousen, Germany, 16-20 August 2016

11th International Adenovirus Meeting, San Diego, USA, 16-20 July 2014

International Workshop: Virus Infection Biology and Adenovirology, Zürich, Switzerland, 12 March 2013

10th International Adenovirus Meeting, Umea, Sweden, 13-17 June 2012

Workshop on human adenovirus, Sapporo, Japan, 13 Sept 2011

9th International Adenovirus Meeting, Dobogókő, Hungary, 26-30 April 2009

Last update on April 15, 2024 by Balázs Harrach (ICTV Adenoviridae Study Group)