| Week | Date | Time | Topic(s) | Participants (Groups) | Presenter(s) | Room Number
| | Week 01 | May 28
| 1:00 - 1:50 PM (50 min)
| Organization
Google Docs/Sites
Software Installation
Groups Assignment
| Session 01
| LGB | 2109 | | | | 1:50 - 2:00 PM (15 min) | Cookies and Coffee
| All Participants
| ---- | Hallway | | | | 2:00 - 2:10 PM (10 min) | Introduction to the Workshop
| All Participants
| Rodolfo Aramayo
| 2104 | | | | 2:10 - 3:00 PM (50 min) | Introduction to High-Throughput DNA Sequencing
| All Participants | Alan Pepper
| 2104 | | | | 3:00 - 3:50 PM (50 min) | Organization
Google Docs/Sites
Software Installation
Groups Assignment
| Session 02
| LGB | 2109 |
| | | | | | | | Week 02 | June 04
| 1:00 - 1:50 PM (50 min) | LaserGene Practical Session
| Session 01 | DNASTAR
| 2109 | | | | 1:50 - 2:10 PM (20 min) | Cookies and Coffee | All Participants | ---- | Hallway | | | | 2:10 - 3:00 PM (50 min) | SeqMan NGen v1.2 (DNASTAR)
| All Participants | Jeff Engelking | 2104 | | | | 3:00 - 3:50 PM (50 min) | LaserGene Practical Session | Session 02 | DNASTAR | 2109 | | | | | | | | | Week 03
| June 11
| 1:00 - 1:50 hs (50 min) | CLC Genomics Workbench Practical Session
| Session 01
| CLCBio | 2109 | | | | 1:50 - 2:10 PM (20 min) | Cookies and Coffee | All Participants | ---- | Hallway | | | | 2:10 - 3:00 PM (50 min) | CLC Genomics Workbench (CLCBio) | All Participants
| Rob Mervis
| 2104 | | | | 3:00 - 3:50 PM (50 min) | CLC Genomics Workbench Practical Session | Session 02
| CLCBio | 2109 | | | | | | | | | | Week 04 | June 18 | 12:50 - 1:00 PM (10 min) | Cookies and Coffee | All Participants
| ---- | Hallway |
|
| 1:00 - 2:50 PM (110 min) | WikiLIMS (BioTeam Inc.) | All Participants
| Stan Gloss
| 2109 | | | | 2:50 - 3:00 PM (10 min) | Cookies and Coffee | All Participants
| ---- | Hallway | | | | | | | | | Week 05
| June 25
| 1:00 - 2:50 PM (110 min) | Basic Unix Review -- Lecture Part I
| All Participants | Lisa Perez
| 2104 | | | | 2:50 - 3:10 PM (20 min) | Cookies and Coffee | All Participants | ---- | Hallway | | | | 3:10 - 5:00 PM (110 min) | Basic Unix Review -- Lecture Part II | All Participants | Lisa Perez | 2104 | | | | | | | | | | Week 06 | July 02
| 1:00 - 2:50 PM (110 min) | Basic Unix Review -- Practical
| Session 01 | Lisa Perez/LGB | 2109 | | | | 2:50 - 3:10 PM (20 min) | Cookies and Coffee | All Participants | ---- | Hallway | | | | 3:10 - 5:00 PM (110 min) | Basic Unix Review -- Practical
| Session 02 | Lisa Perez/LGB | 2109 | | | | | | | | | | Week 07 | July 09 | 12:50 - 1:00 PM (10 min) | Cookies and Coffee | All Participants | Lisa Perez/LGB | Hallway | | | | 1:00 - 2:50 PM (110 min) | Advanced Unix Data Manipulation | All Participants | ---- | 2109 | | | | 2:50 - 3:00 PM (10 min) | Cookies and Coffee | All Participants | Lisa Perez/LGB | Hallway | | | | | | | | | | Week 08 | July 16
| 12:50 - 1:00 PM (10 min) | Cookies and Coffee
| All Participants | ---- | Hallway | | | | 1:00 - 3:00 PM (120 min) | Open Source Software Review I | All Participants | Xin Zhou/LGB | 2109 | | | | | | | | | | Week 09 | July 23
| 12:50 - 1:00 PM (10 min) | Cookies and Coffee
| All Participants | ---- | Hallway | | | | 1:00 - 3:00 PM (120 min) | Open Source Software Review II - Galaxy
| All Participants | LGB | 2109 | | | | | | | | | Week 10
| July 30
| 12:50 - 1:00 PM (10 min) | Cookies and Coffee | All Participants | ---- | Hallway | | | | 1:00 - 3:00 PM (120 min) | Sequencing Software and Bioinformatics (Roche) | All Participants | LGB | 2109 |
Location = Chemistry Building
LGB = Laboratory for Genome Bioinformatics
For questions/comments, please send an email to lgb@tamu.edu
|
|
